Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy13g3019 ATGGGTTTGTTCCAAGATAAGCGTGTGGTTTACAAGCCTGTGAAGGATGTTAACTTAGGCCCTCATAGCACTGAATTCTATTTCCATGACAATGTTAAAGCACCACGCATGACTGGCATTGTAGTCAAGATTTTCACTCTCTTGTTGGAAACTCGAGTATTTAGAACCTCCATATTGTATCTACTCAAGAGGAATAATCTTTTTCACAAGCTTATTACAAATGCAGATTTGGAAGATTCACCCCTCTATGTTCCCTTACATCACTTTGAAGACCACAGAGAACAAGAAGTCAAATGCATAGATCATGCTTTAACTCCACAAGAGCAAGTTCAGCTTTCAATAGATTGCTTGCCTACATCTTCATCAGAAGATGATGATGCACTTAATGGAAAAAATTCTTCATTCTGTCGGTGGACAATAATGGATTATTCTAGAGCCTATAGCTCAGGAGATATAACACCACGCATGGTCGCAGAACGCTTTATAGCTGCTGTTGCTGAATCTTCAAAAGCTCAACTCCAAATGGGATTCTTTATTAACTACAACACTGAAGATATACTGAGGCAAGCAGATGAATCAACTCTTAGATATCAGAGAGGGGAACCTATCTCTGTCTTAGATGGAGTCCTAGTCGCTATCAAGGATGAAATAGATTGCTTGCCCTATCCAACCACAGGAGGTACAAAGTGGTTGCACAAAGAAAGGCCTTGTGCAGATGATGCTTGCTGTGTCGGGCGGCTAAGGTTATGTGGCGCCATACTTTCTGGGAAGACTAATATGCAAGAACTAGGGGCTGGAACTAATGGAATCAATCCGCATTATGGGGCTACTAGGAACCCATACGATTCGAATAAGATCGCTGGAGGTTCTTCGAGTGGATCTGCTGCTGTGGTGTCTGCAGGGCTATGCCCTGTTGCCCTTGGTGTGGATGGGGCAGGATCTGTGAGAATTCCTGCAGCTCTTTGTGGTGTTGTTGGTCTGAAACCAACTTTTGGTCGTGTACCTCATTCCGGAGTTCTTCCTCTAAACTGGACAGTTGGGATGGTGGGAATACTAGCAGGCACAGTTGAGGATGCATTGATCACTTATGCAGCTATCTCTGGTGAAATTCCCTCCAATCAGCCATCCAAAATACCTATCAATCTCCCACTGCTGCCAATGACAAAGTCTATATCTGACATCAAGTTGGCAAAATATGGAACGTGGTTCAATGATTGCAGTGATGATATCAGAAGATGCTGCTCTCATGCTTTGAACAAACTTCAGGATCTTTATGGTTGGGAGACTGTAGATGTTACTATACCAGACATAGAAGTAATGTTCCGAGCACATTATCTAACAATCGGATCAGAGTGCTCCACTTCGCTTGATTCCTTTCGAGAAAAGAATTTTGCAGAATTAGGATGGGATACAAGGGTAGCACTTAATTTCTATAGTGCTTTCAGCAGCATGGAGTATATCAAAGCTCAAAAAATTAGGAATCGGCAGTTACAGTTTCACAAGAAAATATTGGCCGAGGCAGATGTCATTGTGTCACCAACAACAGGTGTCACTGCAAACCCAATTCAAGAGGATGCTATAAAGACTGGTGACTTTGACTACCCAAATGCAGCTGCACTTGTTCGGTATTCCATATCAGGAAACTTTTTGGGACTTCCTGCGGTGACTATTCCAGTTGGATACAGTGAATTGGGTTTGCCTATTGGTCTTCAATTTATAGGAAAGCCTTGGGCTGAAGCAACACTCATTCACTTGGCATTTGCAATGCAGGCCATCTGCATGCCGGAATACAGAAAGCCAGCAGTTTTCTATGACTTGCTAAGAGAAAATGAAAGTTAA 1839 0.4258 MGLFQDKRVVYKPVKDVNLGPHSTEFYFHDNVKAPRMTGIVVKIFTLLLETRVFRTSILYLLKRNNLFHKLITNADLEDSPLYVPLHHFEDHREQEVKCIDHALTPQEQVQLSIDCLPTSSSEDDDALNGKNSSFCRWTIMDYSRAYSSGDITPRMVAERFIAAVAESSKAQLQMGFFINYNTEDILRQADESTLRYQRGEPISVLDGVLVAIKDEIDCLPYPTTGGTKWLHKERPCADDACCVGRLRLCGAILSGKTNMQELGAGTNGINPHYGATRNPYDSNKIAGGSSSGSAAVVSAGLCPVALGVDGAGSVRIPAALCGVVGLKPTFGRVPHSGVLPLNWTVGMVGILAGTVEDALITYAAISGEIPSNQPSKIPINLPLLPMTKSISDIKLAKYGTWFNDCSDDIRRCCSHALNKLQDLYGWETVDVTIPDIEVMFRAHYLTIGSECSTSLDSFREKNFAELGWDTRVALNFYSAFSSMEYIKAQKIRNRQLQFHKKILAEADVIVSPTTGVTANPIQEDAIKTGDFDYPNAAALVRYSISGNFLGLPAVTIPVGYSELGLPIGLQFIGKPWAEATLIHLAFAMQAICMPEYRKPAVFYDLLRENES* 613
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy13g3019 612 SUPERFAMILY Amidase signature (AS) enzymes 134 592 IPR036928 -
Ahy13g3019 612 PANTHER FATTY ACID AMIDE HYDROLASE-LIKE PROTEIN 1 609 - -
Ahy13g3019 612 PANTHER TRANSAMIDASE 1 609 IPR000120 GO:0003824
Ahy13g3019 612 Gene3D Amidase signature (AS) domain 140 593 IPR036928 -
Ahy13g3019 612 Pfam Amidase 172 582 IPR023631 -
Ahy13g3019 612 ProSitePatterns Amidases signature. 288 319 IPR020556 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy13g3019 Ahy-Chr13 121743345 121747843 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy13g3019 1 610 Acyl Lipid Metabolism Gene Families AT5G64440 42.122 1.73e-163 479
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy13g3019 - - gmx:100784932 983.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy13g3019 13 121743345 121747843 Ahy18g2807 18 132338217 132343077 ECH
Ahy13g3019 13 121743345 121747843 Ahy13g3019 13 121743345 121747843 ECH
Ahy13g3019 13 121743345 121747843 Ahy3g2682 3 119075255 119080650 hybridization