Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy13g3004 ATGGGGGGTCTTTGTTCCAAATCTGCCAAGGGTGGTGACAGGGTGGTTGCCACCACAGATGGCGCCAAAGAAAACCATAAGAGCTACAAGACCACCGTGCCTTCTGATTTGGCACCTGCACCTCACACAAAGGAGGACAATAACAAACATGAACATGGTGCTGAGAATGCTGCAGGGACTGGTGCTGATGAATTCTATGATGGAATCCCACGCTATAATGATTCTTTTCCGAATAAGTCAAGGTCTGTAAGGTCAAGGCAGACTGCTGTTGCAAAGGTTTCAGAGGTGAGTTCACGTCTGGGCAGAGCCGGTACTTATGGAATTGGGAAGGCAGTTGATGTTTTGGACACTCTTGGTAGCAGCATGACAAGTTTAAATGCTGGCAATGGGTTCGTTTCGGGCACTGTGACAAAAGGGAATGAAATTACTATCTTAGCATTTGAGGTAGCAAACACAATTGTGAAGGCTTCTAATCTTATGGAATCTCTTTCTCCTACAAGTATTAAGCACCTGAAAGAAGAGGTGCTTCCTTTAGAGGCTGTGCAAGATTTGGTATCAAAGGATACGGATGAACTTCTAAGAATTGTTGCTGCAGATAAGAGGGAGGAGTTGAAAGTTTTTTCTGATGAAGTGATTCGATTTGGAAATCGTTCAAAGGATCCTCAGTGGCACAACTTGGACCGTTACTTTGAGAAAATTAGCAGAGAACTTAATCCTCAAAGACAATCAAGGGATGAGGCAGAATTGATCATGCAGCAATTGATGAACTGGGTTCAATTTACGGCTGAATTATACCACGAGTTACATGCTTTGGATAGATTTGAACAAGATTATCAACGTAAGCGTGAAGAGGAGGATAACTCAAGTGCAACTCAAAGCGGTGATAGCCGTTCAATCTTAAGGGCAGAAGTAAAAAGCCAAAAGAAGCAAGTTAAACATTTAAAGAAAAAGTCGCTCTGGTCCAGAAGCTTGGAGGAGGTTATGGAGAAGCTTGTAGACATTGTAAGTTTTTTACATCTGGAGATAGATAACATCTTTGGCAGTCCAGATGTCCGTAAACCATTAATCGGAACCATGAGCAATCGCCAAAGATTGGGCCCTGCGGGCCTTTCTTTGCATTATGCAAATATAGTGCTTCAAATTGATACTCTTGTTGCCAGATCCAGTTCTATGCCTGCGAATACGAGAGATTCGTTATATCAGAGCTTGCCTCCTAATATAAAGTCAGCTTTGCGTTCCAAATTACCGTCCTTTCATGTTGTAGAAGAGCTCACTATAGCAGATATAAAAAATGAGATGGAGAAAACATTGCATTGGTTGGTTCCAATTGCTACAAATACAGCCAAGGCCCATCATGGTTTTGGTTGGGTAGGAGAGTGGGCAAACACTGGCTCTGAGCTGAATAAGAAGACCTTGAAGACCGATATAATGCGGATCGAAACATTCCACCATGCAGATAAAGACAAAGTGGAAAATTATATTCTTGAACTTCTCTTGTGGCTTCAGCGTTTGGCCATCAAAAGTAAGGTTGGCATAGATGCAGGCGAAATGAGGCCTACCACGAAATCTATCGGCACTGCTCCACAGAAGACAAATCATTCTGAATTGCCGTTGCTAACAACTGATGAGCAGAACATGTTGCAGGATGCAAGTAAGAGATTCCGAATCAGAGGGATCAGTAAAAGCTTGGACCTGGATAATGTGAAGGCTAGCTTAACAGACAAGAGCATACTTACAAAGAGTAGCAGTTACTCATCAACGGTTAGATGCAAGGAATTTTCTTTTAATAGGATTTGCTCTAAGCTTCCCGTGATTGATTTTGATATCGACAAGAAGAGAGCGTTGGATCTGATCGATAGACTAGACGTGCCTAGATAA 1878 0.4244 MGGLCSKSAKGGDRVVATTDGAKENHKSYKTTVPSDLAPAPHTKEDNNKHEHGAENAAGTGADEFYDGIPRYNDSFPNKSRSVRSRQTAVAKVSEVSSRLGRAGTYGIGKAVDVLDTLGSSMTSLNAGNGFVSGTVTKGNEITILAFEVANTIVKASNLMESLSPTSIKHLKEEVLPLEAVQDLVSKDTDELLRIVAADKREELKVFSDEVIRFGNRSKDPQWHNLDRYFEKISRELNPQRQSRDEAELIMQQLMNWVQFTAELYHELHALDRFEQDYQRKREEEDNSSATQSGDSRSILRAEVKSQKKQVKHLKKKSLWSRSLEEVMEKLVDIVSFLHLEIDNIFGSPDVRKPLIGTMSNRQRLGPAGLSLHYANIVLQIDTLVARSSSMPANTRDSLYQSLPPNIKSALRSKLPSFHVVEELTIADIKNEMEKTLHWLVPIATNTAKAHHGFGWVGEWANTGSELNKKTLKTDIMRIETFHHADKDKVENYILELLLWLQRLAIKSKVGIDAGEMRPTTKSIGTAPQKTNHSELPLLTTDEQNMLQDASKRFRIRGISKSLDLDNVKASLTDKSILTKSSSYSSTVRCKEFSFNRICSKLPVIDFDIDKKRALDLIDRLDVPR* 626
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy13g3004 625 MobiDBLite consensus disorder prediction 42 57 - -
Ahy13g3004 625 Pfam Domain of unknown function (DUF3475) 144 200 IPR021864 GO:0045927
Ahy13g3004 625 PANTHER DUF668 FAMILY PROTEIN 2 625 - -
Ahy13g3004 625 Pfam Protein of unknown function (DUF668) 364 449 IPR007700 GO:0045927
Ahy13g3004 625 Coils Coil 297 317 - -
Ahy13g3004 625 MobiDBLite consensus disorder prediction 279 298 - -
Ahy13g3004 625 MobiDBLite consensus disorder prediction 1 64 - -
Ahy13g3004 625 PANTHER OS01G0873900 PROTEIN 2 625 IPR045021 GO:0045927
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy13g3004 Ahy-Chr13 121153166 121159614 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy13g3004 - - gmx:100804075 899.042
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy13g3004 13 121153166 121159614 Ahy13g3004 13 121153166 121159614 ECH
Ahy13g3004 13 121153166 121159614 Ahy3g2665 3 118213518 118220009 hybridization
Ahy13g3004 13 121153166 121159614 Ahy8g2545 8 48331182 48337133 PCT
Ahy8g2545 8 48331182 48337133 Ahy13g3004 13 121153166 121159614 PCT