Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy13g2960 ATGGGACCTTTGAAGTGGGCTCTTCTTGGGGTTCTTCTTTCTGCTTCTCTCTTTGCGATTGATTCGGTCGAGCTGCGCAGGAACCAACCCACCGAAAGGATATCAGGTAGTGCTGGTGATGTATTGGAAGATGATCCAGTGGGAAGGTTGAAAGTTTTTGTTTATGAACTTCCAAGTAAATATAATAAGAAAATTCTGCAAAAGGACCCGAGATGCCTCAACCATATGTTTGCTGCCGAGATCTTTATGCACCGGTTTCTGTTATCTAGCCCTGTCCGAACTCTTAATCCTGAAGAAGCTGATTGGTTTTATACCCCTGTATATACTACCTGTGACTTGACACCAAATGGTCTCCCTTTGCCCTTCAAATCACCACGAATGATGAGAAGTGCCATACAGCTTATTTCTGCAAATTGGCCATATTGGAACCGGACAGAAGGTGCTGATCATTTCTTTGTAGTTCCTCATGACTTTGGGGCATGTTTTCATTATCAAGAAGAAAAGGCAATTGAGAGAGGGATTCTTCCGCTGCTACAGCGTGCAACATTGGTTCAAACATTTGGACAGAGGAATCATGTATGCTTGAAAGAGGGCTCAATCACCATTCCTCCATATGCTCCACCACAAAAAATGCATACACACTTAATTCCTGATAAGACCCCCAGGTCCATTTTTGTTTACTTCAGAGGACTTTTTTATGATGTTGGAAATGACCCTGAAGGTGGATACTATGCAAGAGGTGCAAGAGCAGCAGTGTGGGAGAACTTTAAGGACAATCCATTATTTGACATTTCCACCGAACATCCAACCACATACTATGAGGACATGCAACGAGCCGTGTTTTGTTTGTGTCCGCTTGGATGGGCCCCTTGGAGCCCAAGATTGGTTGAGGCTGTGATATTTGGTTGCATCCCTGTTATTATTGCAGATGATATTGTCCTGCCATTTGCTGATGCAATTCCATGGGAAGAGATTGGGGTGTTTGTCGATGAGGAGGATGTCCCTAAGTTGGATACTATACTCACATCCATCCCACCAGAAGTTATACTAAGGAAACAAAGATTGCTTGCTAACCCTTCCATGAAGCAAGCTATGCTTTTCCCGCAACCTGCTCAACCGGGAGATGCTTTCCATCAAGTTTTGAATGGCCTTGCCCGGAAATTGCCACACGACAAGAATGCGTTCTTGAAACCAGGGGAGAAGGTCTTGAATTGGACTGCTGGACCTGTGGGTGACCTTAAACCTTGGTAG 1251 0.4452 MGPLKWALLGVLLSASLFAIDSVELRRNQPTERISGSAGDVLEDDPVGRLKVFVYELPSKYNKKILQKDPRCLNHMFAAEIFMHRFLLSSPVRTLNPEEADWFYTPVYTTCDLTPNGLPLPFKSPRMMRSAIQLISANWPYWNRTEGADHFFVVPHDFGACFHYQEEKAIERGILPLLQRATLVQTFGQRNHVCLKEGSITIPPYAPPQKMHTHLIPDKTPRSIFVYFRGLFYDVGNDPEGGYYARGARAAVWENFKDNPLFDISTEHPTTYYEDMQRAVFCLCPLGWAPWSPRLVEAVIFGCIPVIIADDIVLPFADAIPWEEIGVFVDEEDVPKLDTILTSIPPEVILRKQRLLANPSMKQAMLFPQPAQPGDAFHQVLNGLARKLPHDKNAFLKPGEKVLNWTAGPVGDLKPW* 417
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy13g2960 416 PANTHER EXOSTOSIN HEPARAN SULFATE GLYCOSYLTRANSFERASE -RELATED 6 410 IPR004263 GO:0006486|GO:0016757
Ahy13g2960 416 PANTHER IRX10L-LIKE PROTEIN, PUTATIVE-RELATED 6 410 - -
Ahy13g2960 416 Pfam Exostosin family 49 344 IPR040911 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy13g2960 Ahy-Chr13 119598328 119601161 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy13g2960 K20870 - gmx:100797122 824.313
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy13g2960 13 119598328 119601161 Ahy3g2621 3 117084985 117087819 hybridization
Ahy18g2890 18 133613039 133616478 Ahy13g2960 13 119598328 119601161 PCT