Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy13g2870 ATGGCGAAGAACAAGATTCACCCTCAAGAACTTGCTCCTTCTAATCCTCCTCTTACTCTTTCTGCAAAGGGAGAAACATATACACTGTGGATGAAATCGTTAGTGTTCCACTCCAATGGTTGCACTGTGTATGATTCCAAGGGTGACATAGTGTACCGTGTCGATAACTATGACCGAAAAGGTACAAGAGAAGTTAACCTCATGGATCTTAGAGGCAGAGTTCTCTGCACCATACACAAGAGATTAATAGCTTTGGGACGACGATGGGAAGGGTACAGATCATGCAATAGCAGTAGTAGTGATATTGAGGAGAAGCCATGGTTCCAAGTGAAGAGAAAGAAAATGATGATGATGAAGAAGAAGAGGAGGGAGAAAGTAGCGTGCGAAATAAGGGTAGGGTGTGTTGAATACTGCATAGTGAGAAATAGTGAGAAAGAAGCAGCATATCGGATAGTAAACAAAGACGGAAATGTCATTGCAGAGGCAAAGCAGAAGCAGTCATCCTCAGGGGTAGTTTTGGGAAATGATGTTCTAACTTTGTATGTGGCTCCTAACACAGATCATTCACTTGTTATGGCTTTGGTTACCGCATATGGATTGATATGCGGCACAATGTAA 618 0.4239 MAKNKIHPQELAPSNPPLTLSAKGETYTLWMKSLVFHSNGCTVYDSKGDIVYRVDNYDRKGTREVNLMDLRGRVLCTIHKRLIALGRRWEGYRSCNSSSSDIEEKPWFQVKRKKMMMMKKKRREKVACEIRVGCVEYCIVRNSEKEAAYRIVNKDGNVIAEAKQKQSSSGVVLGNDVLTLYVAPNTDHSLVMALVTAYGLICGTM* 206
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy13g2870 205 SUPERFAMILY Tubby C-terminal domain-like 23 202 IPR025659 -
Ahy13g2870 205 Pfam LURP-one-related 21 196 IPR007612 -
Ahy13g2870 205 Gene3D - 20 204 IPR038595 -
Ahy13g2870 205 PANTHER PROTEIN LURP-ONE-RELATED 4 4 203 - -
Ahy13g2870 205 PANTHER - 4 203 IPR007612 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy13g2870 Ahy-Chr13 114943436 114947313 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy13g2870 - - adu:107479966 391.349
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy13g2870 13 114943436 114947313 Ahy13g2870 13 114943436 114947313 ECH
Ahy13g2870 13 114943436 114947313 Ahy3g2534 3 112506952 112510516 hybridization
Ahy5g1599 5 42072443 42073462 Ahy13g2870 13 114943436 114947313 PCT