Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy13g2826 ATGTGGTTTCTTGGTTGGAAAGGAGAATCTGGCTTCTCAGCCTCCTCCACGGCGGAGCAAGTCACTCAAGGCATTGATGGACACGGCCTCACCGCCATCGTCACCGGGGCTACAAGTGGCCTTGGTTTGGAGACGACGCGAGTTCTTGCACTGCGCGGTGTCCATGTTGTTATGGCTGTAAGGAATGTTGAATCTGGCACCAAGGTCAAAGAAACAATATTGAAGGAAATTCCCTCAGCTAAAATTGATGTCATGGAATTAGATCTTTGCTCTATGGCATCTGTTAGGAAGTTTGCATCAGATTATATTTCTTCTGAACGTCCACTCAATATCCTAATTAACAATGCAGGGGTGATGGCAACTCCATTCCAGCTTTCTCAAGACAACATTGAGATGCAGTTTGCAACGAATCATTTGGGTCATTTTCTCTTGACAAACCTTTTACTACAAACTATGAAAAAAACTGTACGTGAATGCAAACGGGAGGGAAGGATAGTCATTCTATCTTCGGAAGCACACAGACTTCCATATCAAGAAGGAATTCGTTTTGATAAGATCAATGATGAATCAGTTTATTATGCTTATGGACAATCAAAGCTTGCTAATATTTTGCATGCCAAAGAACTTACGAGGCGCTTTAAGGAAGGAGTTGAAATAACCGCTAACGCACTTCATCCAGGATCAATTATTACAAATATTCTGCGTTACCATGGTTACATTAATGCTGTTGCTAATATGGTGGGTAAATACTTACTTAAAAATGTGCAACAGGGAGCTGCCACTCAATGTTATGTAGCATTGCATCCACAAGTTAAGGGAATATCTGGTGAGTACTTTATGGACAGCAATAAGGCAACGCCAACCCATCTGGCTAACGATTCAGAGCTGGCTAAAAAACTATGGGAGTTCAGCGTAAGCCTAACTAATCAAAAGTAG 936 0.4188 MWFLGWKGESGFSASSTAEQVTQGIDGHGLTAIVTGATSGLGLETTRVLALRGVHVVMAVRNVESGTKVKETILKEIPSAKIDVMELDLCSMASVRKFASDYISSERPLNILINNAGVMATPFQLSQDNIEMQFATNHLGHFLLTNLLLQTMKKTVRECKREGRIVILSSEAHRLPYQEGIRFDKINDESVYYAYGQSKLANILHAKELTRRFKEGVEITANALHPGSIITNILRYHGYINAVANMVGKYLLKNVQQGAATQCYVALHPQVKGISGEYFMDSNKATPTHLANDSELAKKLWEFSVSLTNQK* 312
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy13g2826 311 Gene3D - 22 311 - -
Ahy13g2826 311 PANTHER NAD(P)-BINDING ROSSMANN-FOLD PROTEIN 2 308 - -
Ahy13g2826 311 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 29 284 IPR036291 -
Ahy13g2826 311 PANTHER RETINOL DEHYDROGENASE 2 308 - -
Ahy13g2826 311 CDD retinol-DH_like_SDR_c_like 29 301 - -
Ahy13g2826 311 Pfam short chain dehydrogenase 31 234 IPR002347 -
Ahy13g2826 311 PRINTS Glucose/ribitol dehydrogenase family signature 217 234 IPR002347 -
Ahy13g2826 311 PRINTS Glucose/ribitol dehydrogenase family signature 107 118 IPR002347 -
Ahy13g2826 311 PRINTS Glucose/ribitol dehydrogenase family signature 31 48 IPR002347 -
Ahy13g2826 311 PRINTS Glucose/ribitol dehydrogenase family signature 157 173 IPR002347 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy13g2826 Ahy-Chr13 112236315 112240036 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy13g2826 33 287 Acyl Lipid Metabolism Gene Families AT3G55290 26.667 4.77e-09 54.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy13g2826 - K19329 gmx:100785176 507.294
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy13g2826 13 112236315 112240036 Ahy13g2826 13 112236315 112240036 ECH
Ahy13g2826 13 112236315 112240036 Ahy3g2499 3 109529451 109531917 hybridization