Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy13g2795 ATGCCTTCCTCAGCAGTTCGCAGGCTCGCTATGGCAGCAGCATCCAGCTCCCTCTCACTCAAGCAGGGACTCTTACTTCGCCCTCTGCGTACCAATCCTCTCACCCGACCTCGTCCTTCTTCCACTTCCCTCCCTTCCAGAAGCTTCCGCAGATGCTACGCCGCTTTCGCCAACGAGAATCGCGAGTACGTCATCGTTGGGGGCGGAAATGCCGCGGGATATGCTGCTCGCACCTTCGTCGAACATGGCATGGCCGATGGTCGTCTTTGTATTGTCACTAAAGAGGCATATGCGCCCTACGAGCGTCCTGCACTCACAAAAGCGTATTTGTTTCCACCGGATAAGAAGCCTGCCCGCCTTCCTGGTTTTCACACCTGTGTTGGATCGGGTGGAGAAAGGCAGACTCCAGAGTGGTATCAAGAGAAGGGGATAGAGATGTTGTATCAAGATCCAGTCAAGGATATTGATATTGAAAAGCAAACTTTGATAACTAATTCTGGAAAACATCTGAAGTATGGCTCACTTATAATTGCTACAGGGAGTTCAGCCTCGAGATTTCCGGAGAAAATTGGGGGAAACCTACCTGGCGTTCATTATATCCGGGAGGTTGCAGATGCTGATGCACTGATTTCATCATTGGGAAAAGCAAAAAAGGTTGTAGTTGTTGGAGGTGGATATATAGGAATGGAGATTGCTGCTGCAACAGTTGCTTGGAAACTTGATACAACAATCATATTTCCTGAGGATCATCTCTTGCAAAGATTGTTCACTCCTTCGCTTGCCCGGAGATACGAGGAACTCTACCAAAAGAATGGTGTCAAAATATTGAAGGGTGCCTCCATAAAAAATTTGGAAGCTGGCTCTGACGGACATGTAGCTGGTGTCAAACTTGGAGATGGATCTGTTGTAGAAGCTGATACGGTAATTGTAGGCATTGGAGCAAAACCTGCTGTGAGTCCCTTTGAGCGGGTGGGCTTGAATACAGAAGTTGGTGGATTACAGGTTGATGGTCAGTTCCGGACTGGCATTCCTGGAATCTTTGCTATCGGTGATGTCGCAGCTTTCCCTTTAAAGATATATAACCGTACTGCTCGAGTGGAACATGTAGATCATGCTCGTCGCTCAGCACAGCACTGTGTAAAATCATTACTCACTGCACAAACTCACACGTACGATTACCTTCCATACTTCTACTCAAGGGTGTTTGAATATGAAGGGAGCCCCAGAAGAGTATGGTGGCAGTTCTTCGGAGACAATGTCGGAGAAACAGTTGAAATTGGAAACTTTGATCCTAAAGTAGCTACCTTCTGGATTGAATCTGGTAAGCTAAAAGGAGTGCTGCTTGAAAGTGGGAGCCCTGAGGAATTTCAGCTCCTGCCTAAACTAGCCAGAAATCAACCCGTAATTGATAAGGCGAAGCTTCAAAGCGCATCTTCTGTTGAGGAGGCCCTAGACATTGCTTGGAGATCCTTGCAAGTTGAAGCTACAGTCTAA 1494 0.4732 MPSSAVRRLAMAAASSSLSLKQGLLLRPLRTNPLTRPRPSSTSLPSRSFRRCYAAFANENREYVIVGGGNAAGYAARTFVEHGMADGRLCIVTKEAYAPYERPALTKAYLFPPDKKPARLPGFHTCVGSGGERQTPEWYQEKGIEMLYQDPVKDIDIEKQTLITNSGKHLKYGSLIIATGSSASRFPEKIGGNLPGVHYIREVADADALISSLGKAKKVVVVGGGYIGMEIAAATVAWKLDTTIIFPEDHLLQRLFTPSLARRYEELYQKNGVKILKGASIKNLEAGSDGHVAGVKLGDGSVVEADTVIVGIGAKPAVSPFERVGLNTEVGGLQVDGQFRTGIPGIFAIGDVAAFPLKIYNRTARVEHVDHARRSAQHCVKSLLTAQTHTYDYLPYFYSRVFEYEGSPRRVWWQFFGDNVGETVEIGNFDPKVATFWIESGKLKGVLLESGSPEEFQLLPKLARNQPVIDKAKLQSASSVEEALDIAWRSLQVEATV* 498
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy13g2795 497 Pfam Pyridine nucleotide-disulphide oxidoreductase 62 376 IPR023753 GO:0016491
Ahy13g2795 497 PRINTS Pyridine nucleotide disulphide reductase class-I signature 62 84 - -
Ahy13g2795 497 PRINTS Pyridine nucleotide disulphide reductase class-I signature 218 243 - -
Ahy13g2795 497 PRINTS Pyridine nucleotide disulphide reductase class-I signature 346 353 - -
Ahy13g2795 497 PRINTS Pyridine nucleotide disulphide reductase class-I signature 306 320 - -
Ahy13g2795 497 PANTHER APOPTOSIS-INDUCING FACTOR 1 39 496 - -
Ahy13g2795 497 Gene3D - 396 482 IPR016156 GO:0016491|GO:0050660
Ahy13g2795 497 PRINTS FAD-dependent pyridine nucleotide reductase signature 305 321 - -
Ahy13g2795 497 PRINTS FAD-dependent pyridine nucleotide reductase signature 331 353 - -
Ahy13g2795 497 PRINTS FAD-dependent pyridine nucleotide reductase signature 64 83 - -
Ahy13g2795 497 PRINTS FAD-dependent pyridine nucleotide reductase signature 172 190 - -
Ahy13g2795 497 PRINTS FAD-dependent pyridine nucleotide reductase signature 218 236 - -
Ahy13g2795 497 SUPERFAMILY FAD/NAD(P)-binding domain 58 358 IPR036188 -
Ahy13g2795 497 Gene3D - 64 379 IPR036188 -
Ahy13g2795 497 Gene3D - 186 313 IPR036188 -
Ahy13g2795 497 PANTHER MONODEHYDROASCORBATE REDUCTASE, CHLOROPLASTIC/MITOCHONDRIAL 39 496 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy13g2795 Ahy-Chr13 109072114 109076855 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy13g2795 167 395 Acyl Lipid Metabolism Gene Families AT1G48030 27.092 1.83e-13 70.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy13g2795 K08232 - gmx:100819919 818.15
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy13g2795 13 109072114 109076855 Ahy13g2795 13 109072114 109076855 ECH
Ahy13g2795 13 109072114 109076855 Ahy3g2463 3 107044187 107048757 hybridization