Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy13g2782 ATGAAGTGCCGATCGGTGGCTTGCATTTGGTCTGGCACCCCCTTCCCCCACCGTGTCACCGCCGTCGCCGCCTTCTCCTCCCCGCCCTCCCTCTTCACCTCCGGATCCGATGGCTCCATCATCTGGTGGTCCATTTCCCCCCAAGTTAAAGCAGTGGCCCTCTTGTGCGGTCACGCAGCTTCCATCACTGATCTTAGCACTTGCAGCCCTCTTCCCGTCGAAGAAGAAGCTGCTGCCGCCGATCATGGTGATGCTGGTGGTGGTGGTGGTGGTGAACGTGGTTCGAGTGATTTAGCGGTGAATTGTAGTTCAAGTAGTAATTTTAGTAGCGCCTTGGTAAGCGCTTGTTCTGATGGGTTCTTGTGTGTTTGGAGTAAAAGCAGTGGACATTGCCGTTGCCGGAGGAAACTGCCACCTTGGGTCGGAACACCGCGCATCATTCGGCCGTTGCCCTCGAGGCCGAGATATGTGTGCATTGCTTGTTCCTACATGGAACAATCTGTGGAGGGAAATGAAGAGACTCACCCCAGGAAGCCTTCTAAATGTACCATTGTTGTTGTAGACACGTACTCGCTTTCCATTACTCAGACTTTGTTTCATGGGAATTTATCTATCGGTCCAGTTAGGTTTATGGCTTTAGTGTTAGGTGATAGTGATGAAAAGGGGTATTCTGTACTTGTGGCTGATTCTGCTGGCAAAAGGCAAATGGTTTCGATATCAGATGACCCCCTTGATCGTGGGGAACCACACAAGGAAACATCTCAGTTGGAGAGTTCTTTTTACTCTGACGGATTGAGTGGTGTGGATCGTGTTGTTTCAGTTTTAACTTACAGGGGTATTGTTGCTTATGTGCTGGAAAATCGCTGTGAATTCAAGTTATTGTCAAGTGATACTACCATTGGAGAGGTTTCCTTTGACAGCAATCTGATCTGTTTAGATGGGCATTTGAATCAAACACATATTGTGGGTGGCCTTTTTCTTGAAAGTGATGATGCAGGGAATTCAGTCAATTTTGTTGAAAGCAGCAACTTGATATCAGTAACTTTTGTTGTTTGGAATAATATAGGGTCTGCAGTTATCTATAAGATAATGAATCAGAATGATGTTTTTCAATGTGAACCTCATTCTGAGATTCCTGCTACTCCTTGTCAATCTGATATGAGATTATCTGTTATTTTCCTACAAATAAATCATTATCTTGTCTGCATCAAGTCAATTTGCTTTCATTTTGAGGAACCTTTGCTATGGAGACCACATGTCACAATCTGGTCACTGCATAGTTTTGATGATAAGCCTGGTAAATTATACCGTCAATACAGGATGATCAGTGATGGTGAATCTTTCGTGCACTGTTTTGGGAAGTCTACTCAGCTTGAAGGACTGGATAGTCTAGAGGCTAAATCTTTTGATCAAAATCAAAGTTCAGAAGATATAAACACCATTCATGTTGATAACATTAGTGATTATTGTGCTAACAAGGGAAAGATGGTCTCTTCTTCCATGATTATCTCTGAGAACCTCTTCACTCCTTATGCTGTTGTATATGGTTTTGTAAGCGGAGAAATAGAGCTTCTAAGATTTGATCTGTTTCAAGGGATTTGCTTTAATGATGCAAGTTCCAACCCTGATGAAAAGTCTATCACATGCAAGCAGCACTTTTCAGGACATACAGGCGCTGTACTTTGTTTGGCAGCACATCAAATGATGGGTAATGCCAATGGCCAAAATCTAAAACGGGTTTTGGTGTCTGGAAGTGCGGATTGTACAATTCGTATATGGGATCTTGACACTAGCCGTCTTATTATGGTAATGCATCATCATGTGGCTCCATTACGTCAAATTATTCTTCCCCCATCTTTGACTGGACATCCTTGGAGTGACTGCTTCCTCTCAGTTGGAGAGGATGCATGTGTAGCTCTTGTTTCTATAGAGACTCTGCGGGTGGAGAGAATGTTCCCTGGACATGTGAACTATCCATCAAAAGTTGTATGGGATGGATCAAGAGGTTATATTGCCTGTCTCTGTCAAACACATTATGGAACTTCTGATGCTACTGATGTGTTGTACATTTGGGATGTAAAGACAGGTTCTCGCGAGCGAGTCCTGCGTGGGACAGCTGCGCATTCAATGTTTAATCACTTTTGTAAAAACATTAGCATGAATTCCATATCTGGCAAATTGCTGAATGGAAATACATCAGTTTCTTCTTTACTTCTTCCGGTAATTGATGATGCAAGGCTCTCTAACTCCCCTGTCAACCTGTCAGAGAACTCACTCACTTCTTCAAAGTCATCACCGAATATTTCAAACATGACTGAGTTGAATTATTCCAGAAGAAATGGAGGCAAAGGAAATTCACCAAAGCCAACTTCATCTTCTCTGTTTAATCTCTGGGGTAACAAGCTTCCTGTCAAATGCGCATGCCCTTTTCCTGGCGTTGTGTCTCTGAGTTTTGATCTTGCCTCGCTGATGCTCTCTTATTGGGGGAATGAATTCATGGAAAATGGTAATTACAATTTGAAGAAGCAAGAAGTTCAGGGTCAAAATTCTGGCGACCAGTATGAAGAATACTTGCTTCGATATAGCCTGTCTATTTTACATTTATGGAATGTAGACAGTGACCTTGATAACTTGCTGATAAGTGACATGAAGCTGAGGAAACCAGAGAATTTTATAGTAGGTTCAGGTCTACAGGGGGATAAAGGATCATTGACATTGACCTTTCCTGGTCTGAGTGCTACTCTAGAGCTCTGGAAATCGTCATCTGAGTTTTGTGCAATGAGATCATTGACAATGGTATCCCTTGCCCAACGTCTGGTTAGCTTATCTCGCTCTGGCTCAGCAGCAAGCAGTGCTTTAGCAGCATTCTATACCCGCAATTTCATGGAAAAGTTTTCAGATATGAAGCCACCTTCATTACAGCTTCTGGTGGCCTTTTGGCAAGATGAGAGTGAACATGTGCGCTTAGCAGCACGCTCTATATTTCATTGTGCTGCCTCTCATGCTATTCCACTACCTCTATGCAATACAAAACCACCTGAGTCAACTAAGACAAGCTCCCAATCTGGAAGTAGAGGCAAAAGCATATCTCCTAGGTCAGAAAAACAAGGAATTTCCCATGTTGAAGAATCCAATATAGTTGCTTGGTTGGAATCATTTGAAGTGCAAGATTGGATTTCTTGTGTTGGGGGAACAAGTCAAGATGCTATGACATCTCACATAATTGTTGCTGCTGCATTGGCTATCTGGTATCCTAGTCTTGTAAAGCCAAGTCTTGCCACCTTAGTTGTTCATCCACTGATGAAGTTGGCTATGGCCATGAATGAGAAATATAGCTCCACTGCGGCCGAGCTCCTTGCAGAGGGCATGGAGAGTACATGGAAAGGATGCATGGCCTCTGAGATACCTCATCTGATTGTGGATATTTTTTTCCAAGTAGAGTTGAGTGGTCCAACTGCCAAAGAAATTCCAGCTTCATCATTTGCTATTAAAAAGACTTTGGTTGAAGTTCTTCTTCCAAGTTTAGCTATGGTTGATATACCAGGTTTTTTGTCTGTAATAGAGAGACAGATTTGGTCTACTGCATCTGATTCGTCTGTCCACTTGGTGTCCCTCTTGACTCTTATAAGGATTATGCGTGGTTCTCCAAGAAACTTGGCTCAATTCCTTGACAAGGTGGTAAACTTCATTTTACATACTGTAGATCCTAGCAACTCAGTTATGCGGAAAGCATGTTACCAGACTTCAATGACAACTTTAAAGGAGGTTGTACGTGTGTATCCTATGGTTGCTGTCAATGATTCATGGACAAGACTTGCAGTTGGGGATGTGATTGGTGAAATTAGCACCTCAAGCATTAGGGTCTATGATATGCAAAGTGTGACAATGATAAAGGTTTTGGATGCAAGTGGGCCTCCTGGACTTCCAAGTTTGCTCACACCAGCATCAGGAACAATGTTAACTGCTGCAATTTCAGCTCTTAGCTTTTCTCCTGATGGAGAGGGGCTAGTTGCTTTCTCTGAACATGGGCTAATGATTAGATGGTGGTCACTAGGATCTGTCTGGTGGGAGAAACTGAGCCGGAACTTTATTCCTGTCCAGTGCACCAAACTTATATTTGTCCCGCCATGGGAGGGATTCTCACCTAATTCATCCAGGTCAAGCATAATCGCCAACATTTTGGAAAATGACAGGAAGCTGAGTGTTCTGGACAATGCTAGGGATTCAAATCACGGGGACAGTATGAAACAATTGCTTCATAATCTGGACCTTACTTATAGGCTAGAATGGGTAGGTGATAGGAAAATACTCCTTACAAGACATGGCCAGGAATTGGGCACTTTTCAGTTATAA 4353 0.43 MKCRSVACIWSGTPFPHRVTAVAAFSSPPSLFTSGSDGSIIWWSISPQVKAVALLCGHAASITDLSTCSPLPVEEEAAAADHGDAGGGGGGERGSSDLAVNCSSSSNFSSALVSACSDGFLCVWSKSSGHCRCRRKLPPWVGTPRIIRPLPSRPRYVCIACSYMEQSVEGNEETHPRKPSKCTIVVVDTYSLSITQTLFHGNLSIGPVRFMALVLGDSDEKGYSVLVADSAGKRQMVSISDDPLDRGEPHKETSQLESSFYSDGLSGVDRVVSVLTYRGIVAYVLENRCEFKLLSSDTTIGEVSFDSNLICLDGHLNQTHIVGGLFLESDDAGNSVNFVESSNLISVTFVVWNNIGSAVIYKIMNQNDVFQCEPHSEIPATPCQSDMRLSVIFLQINHYLVCIKSICFHFEEPLLWRPHVTIWSLHSFDDKPGKLYRQYRMISDGESFVHCFGKSTQLEGLDSLEAKSFDQNQSSEDINTIHVDNISDYCANKGKMVSSSMIISENLFTPYAVVYGFVSGEIELLRFDLFQGICFNDASSNPDEKSITCKQHFSGHTGAVLCLAAHQMMGNANGQNLKRVLVSGSADCTIRIWDLDTSRLIMVMHHHVAPLRQIILPPSLTGHPWSDCFLSVGEDACVALVSIETLRVERMFPGHVNYPSKVVWDGSRGYIACLCQTHYGTSDATDVLYIWDVKTGSRERVLRGTAAHSMFNHFCKNISMNSISGKLLNGNTSVSSLLLPVIDDARLSNSPVNLSENSLTSSKSSPNISNMTELNYSRRNGGKGNSPKPTSSSLFNLWGNKLPVKCACPFPGVVSLSFDLASLMLSYWGNEFMENGNYNLKKQEVQGQNSGDQYEEYLLRYSLSILHLWNVDSDLDNLLISDMKLRKPENFIVGSGLQGDKGSLTLTFPGLSATLELWKSSSEFCAMRSLTMVSLAQRLVSLSRSGSAASSALAAFYTRNFMEKFSDMKPPSLQLLVAFWQDESEHVRLAARSIFHCAASHAIPLPLCNTKPPESTKTSSQSGSRGKSISPRSEKQGISHVEESNIVAWLESFEVQDWISCVGGTSQDAMTSHIIVAAALAIWYPSLVKPSLATLVVHPLMKLAMAMNEKYSSTAAELLAEGMESTWKGCMASEIPHLIVDIFFQVELSGPTAKEIPASSFAIKKTLVEVLLPSLAMVDIPGFLSVIERQIWSTASDSSVHLVSLLTLIRIMRGSPRNLAQFLDKVVNFILHTVDPSNSVMRKACYQTSMTTLKEVVRVYPMVAVNDSWTRLAVGDVIGEISTSSIRVYDMQSVTMIKVLDASGPPGLPSLLTPASGTMLTAAISALSFSPDGEGLVAFSEHGLMIRWWSLGSVWWEKLSRNFIPVQCTKLIFVPPWEGFSPNSSRSSIIANILENDRKLSVLDNARDSNHGDSMKQLLHNLDLTYRLEWVGDRKILLTRHGQELGTFQL* 1451
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy13g2782 1450 SUPERFAMILY WD40 repeat-like 13 704 IPR036322 GO:0005515
Ahy13g2782 1450 MobiDBLite consensus disorder prediction 1008 1038 - -
Ahy13g2782 1450 Gene3D - 4 242 IPR015943 GO:0005515
Ahy13g2782 1450 ProSiteProfiles Trp-Asp (WD) repeats profile. 581 603 IPR001680 GO:0005515
Ahy13g2782 1450 SUPERFAMILY ARM repeat 925 1247 IPR016024 -
Ahy13g2782 1450 PANTHER RABCONNECTIN-3B, ISOFORM A 1 1450 - -
Ahy13g2782 1450 MobiDBLite consensus disorder prediction 1011 1035 - -
Ahy13g2782 1450 MobiDBLite consensus disorder prediction 752 788 - -
Ahy13g2782 1450 ProSitePatterns Trp-Asp (WD) repeats signature. 581 595 IPR019775 -
Ahy13g2782 1450 SUPERFAMILY WD40 repeat-like 1258 1353 IPR036322 GO:0005515
Ahy13g2782 1450 Pfam WD domain, G-beta repeat 548 594 IPR001680 GO:0005515
Ahy13g2782 1450 Gene3D - 454 776 IPR015943 GO:0005515
Ahy13g2782 1450 SMART WD40_4 645 692 IPR001680 GO:0005515
Ahy13g2782 1450 SMART WD40_4 546 594 IPR001680 GO:0005515
Ahy13g2782 1450 SMART WD40_4 1313 1350 IPR001680 GO:0005515
Ahy13g2782 1450 SMART WD40_4 5 44 IPR001680 GO:0005515
Ahy13g2782 1450 SMART WD40_4 48 125 IPR001680 GO:0005515
Ahy13g2782 1450 PANTHER RABCONNECTIN-3B, ISOFORM A 1 1450 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy13g2782 Ahy-Chr13 107784859 107792021 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy13g2782 K24738 - gmx:100816646 2103.56
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy13g2782 13 107784859 107792021 Ahy13g2782 13 107784859 107792021 ECH
Ahy13g2782 13 107784859 107792021 Ahy3g2452 3 106166217 106173597 hybridization