Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy13g2774 ATGGCTTATCAGAATCAGAACCAGAGCCAGCAGCGGAGGGATCAATTCAAACCATTAGCTCCATTCATATCATCGAGTCCCAGTCCCCCTCCCAGTCCCTTCAACACTAACCACCATGCCATTTCCGAAAAGCAAATCAGTCGCATCAAGAGAGCCCTCTGTTGTTGCGGCTGCATCACTGCCCTCTTCTGCATAGTCGCAGTCATACTCATAGTTCTTAGCTTCACCGTTTATAACGTCACGGATCCAGAGGTGAGGCTCAACGGCGTTACAATCATCAACGGAACCCTAAACCTAAAGGCAAACGCCACTTCTCCTTCTCCTTCTGGTAACGTCACGCTTCTCGCTGACTTGTCCGTGAAAAACCGAAACTCCTTCGCCTTCAGGTACGGCACCACAACCACAACGGTTTATTACGAGGGGAGGGGAATCGGCGAGGGAACGATGCCGCCGGGGAAGACGAAAGGGAAGAGGACAACGAGGTTTAACGTGACGATGCAAGTGGTGGCGCAGAAGCTGGTGGATGCGCCGGGGCTGAGGAGCGACGTTGAGGACGATCAGGCAGTGAATATAAGCAGTTACGCTCGGATTGATGGGAAGGTGAAGGTTCTAAATTTGTTCTACAGAAAAGTTGTGGTTCTTTTGAATTGCACAGTTGAATACAACGTCACCACTGGCCATATCTTGCATGGTGACAACTGCCTCAACGATATTAGATTGTAG 723 0.5021 MAYQNQNQSQQRRDQFKPLAPFISSSPSPPPSPFNTNHHAISEKQISRIKRALCCCGCITALFCIVAVILIVLSFTVYNVTDPEVRLNGVTIINGTLNLKANATSPSPSGNVTLLADLSVKNRNSFAFRYGTTTTTVYYEGRGIGEGTMPPGKTKGKRTTRFNVTMQVVAQKLVDAPGLRSDVEDDQAVNISSYARIDGKVKVLNLFYRKVVVLLNCTVEYNVTTGHILHGDNCLNDIRL* 241
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy13g2774 240 Pfam Late embryogenesis abundant protein 118 217 IPR004864 -
Ahy13g2774 240 Gene3D - 67 216 - -
Ahy13g2774 240 SUPERFAMILY LEA14-like 66 176 - -
Ahy13g2774 240 PANTHER LATE EMBRYOGENESIS ABUNDANT PROTEIN 35 238 - -
Ahy13g2774 240 PANTHER LATE EMBRYOGENESIS ABUNDANT (LEA) HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY 35 238 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy13g2774 Ahy-Chr13 107333108 107334321 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy13g2774 - - adu:107479837 437.187
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy13g2774 13 107333108 107334321 Ahy13g2774 13 107333108 107334321 ECH
Ahy13g2774 13 107333108 107334321 Ahy3g2441 3 105307464 105308692 hybridization