Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy13g2710 ATGGCGGAGGCCCATGTTCGCATGATTTTGCACACAAGAAGGAAGGAAGCTTCTTCTCGATCCCAGATCAAAGTCAAAACCCGAAACAAACACAAACACAAACACAGACACAGCACACAGGTTTCAGAAGAAATGGAGACGATCAAAGGGAAGAGTGAAAGCGAATTGGTGAGGCTGTGCATAGAAGCTGCGTGCGAGAGCAGAGAGAGCATCCAGAAATGGCGGATGCAGAGGCGGACCTTCGACCATCTCCCTTCTCATCTCGCCGACGGCCTCATCCGGCGCCTGGTGTCCCGGCGGCTCCTGTACCCGTCGCTTCTAGAAGTGTTCAAACAGAGCGCCGAAGAAGTTGATTTGAGAGGCGTTTACAACGTGGATGCAGAATGGCTTGCGTACTTGGGAGCGTTTCGGCAGTTGCGGTATTTGAACCTTTCCGATTGCCACAGAATCACTTCTTCTGCTCTTTGGCCTATTTCTGGAATGGCTTCTGTTAACCACTTGCACCTCTCTAACTGCTCCAAGCTCAACGACGCTGCTATTCATCACATTCTCTCTCTCTCTAACCTCCAGAAATTACAAATCTCGCAAACAAGTGTCACCGCCAAAGGCATCAAACTTCTCGCCTCCCTTAAAAACCTCTCTCTTCTCGACTTAGGCGGCTTACCTGTTGATGACGTCTCCTTAACTTCTTTACAGGTACTGAAAAAGTTAGAATATCTTGATCTATGGGGTAGTAAGGTATCAAATGAAGGGGCTAACATCCTCAATAACTTCCCCAAGTTAACCTATCTAAATCTTGCTTGGACTAATGTCACAAAATTGCCTAATTTATCATCTATTGAATGCCTCAACATGAGTAATTGTACTATTGATTCAATACTTGAAGATGATGAAGCTCCTTTGGCAAAACTTATTCTCTCCGGTGCTACATTCAGGAGCGAATCGGAGTTTCTCTTACACGCCAATACAAACTTTTTGTCCTCTCTCGATGTAGCTCATTCTGGCCTTAGTAAATTCTTCTTCTTGAGTAAATTGAAAGTGATAGAACAGCTCAATCTCAGCTCTTGCATGGTCACTGATGATTCGATTGAAATGATCGCGGGTGTTGGTGCAAGCTTGAAGAGTTTGAATCTGACTGGTACCAAGGTCAGCTCCGCAGGCATAGGGATTTTAGCTGGACATGTCTCCAATCTTGAGATGCTTTCATTATCTCAGACACTGGTGGATGATACTGCCATCTTGTATATCAGCATGATGCCTTCTTTAAAGGTTCTTGACCTTAGCAATACAATAGTGAAAGGATGCTTACCACAGGAAAATACCGACCACGGCTCACCACACTCTCTAACAGCTCTACAAAGTCTTAAACAATTAGAAAGCTTGAATTTGGAATACACACGAGTTAGGGATGAAGCTTTAAGCCCTTTGTCAAGCTTCAAAGAGCTGAGATATTTGTTTCTCAAAAGTGCGTCACTTGCAGACATCTCACTTTACTATTTATCATCAATTCCTAAATTGACAAGTCTTAGTATTTGTGATGCGGTATTGACAAATTATGGGCTTCATGTGTTTAAACCTCCTCAAACACTGAAACTAATGGACCTCCGAGGTTGTTGGCTCTTAACTGAGGACACTATCATGTCGTTCTGTAGAATTCATCCACAAATTGAAGTACAGCATGAACTTGTTACCATTGTTCCTCTTCACCAAGGTGGACCAAATCATCCTTCTCCGTCTCAGTTAACTTCAAAGGCTACGCAAGCAGCTAAAAAGAATGAAAACTTGTCTATATCTCCAGATTTTATAGATCAAAGGTTGAAGTATAGCAGAGACGAATTGCTTGCGTTGCAGTTCATGTCTTTGCCTATTGTATCCTCTAGTGAGAGTGGCGATTCAATATTCAAGCAACAGTTAAATTGA 1920 0.4318 MAEAHVRMILHTRRKEASSRSQIKVKTRNKHKHKHRHSTQVSEEMETIKGKSESELVRLCIEAACESRESIQKWRMQRRTFDHLPSHLADGLIRRLVSRRLLYPSLLEVFKQSAEEVDLRGVYNVDAEWLAYLGAFRQLRYLNLSDCHRITSSALWPISGMASVNHLHLSNCSKLNDAAIHHILSLSNLQKLQISQTSVTAKGIKLLASLKNLSLLDLGGLPVDDVSLTSLQVLKKLEYLDLWGSKVSNEGANILNNFPKLTYLNLAWTNVTKLPNLSSIECLNMSNCTIDSILEDDEAPLAKLILSGATFRSESEFLLHANTNFLSSLDVAHSGLSKFFFLSKLKVIEQLNLSSCMVTDDSIEMIAGVGASLKSLNLTGTKVSSAGIGILAGHVSNLEMLSLSQTLVDDTAILYISMMPSLKVLDLSNTIVKGCLPQENTDHGSPHSLTALQSLKQLESLNLEYTRVRDEALSPLSSFKELRYLFLKSASLADISLYYLSSIPKLTSLSICDAVLTNYGLHVFKPPQTLKLMDLRGCWLLTEDTIMSFCRIHPQIEVQHELVTIVPLHQGGPNHPSPSQLTSKATQAAKKNENLSISPDFIDQRLKYSRDELLALQFMSLPIVSSSESGDSIFKQQLN* 640
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy13g2710 639 SMART LRR_CC_2 479 503 IPR006553 -
Ahy13g2710 639 SMART LRR_CC_2 161 186 IPR006553 -
Ahy13g2710 639 SMART LRR_CC_2 345 369 IPR006553 -
Ahy13g2710 639 SMART LRR_CC_2 136 160 IPR006553 -
Ahy13g2710 639 SMART LRR_CC_2 210 234 IPR006553 -
Ahy13g2710 639 SUPERFAMILY RNI-like 449 550 - -
Ahy13g2710 639 Gene3D Ribonuclease Inhibitor 301 434 IPR032675 -
Ahy13g2710 639 Gene3D Ribonuclease Inhibitor 58 193 IPR032675 -
Ahy13g2710 639 Gene3D Ribonuclease Inhibitor 194 278 IPR032675 -
Ahy13g2710 639 PANTHER F-BOX/LRR-REPEAT PROTEIN 13 52 636 - -
Ahy13g2710 639 Gene3D Ribonuclease Inhibitor 435 565 IPR032675 -
Ahy13g2710 639 PANTHER RECEPTOR-LIKE PROTEIN 14 52 636 - -
Ahy13g2710 639 MobiDBLite consensus disorder prediction 12 47 - -
Ahy13g2710 639 SUPERFAMILY RNI-like 123 439 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy13g2710 Ahy-Chr13 101457740 101460269 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy13g2710 133 292 Receptor kinase-like Gene Family AT4G08850 27.108 7.57e-06 47.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy13g2710 - - aip:107630709 1215.29
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy13g2710 13 101457740 101460269 Ahy13g2710 13 101457740 101460269 ECH
Ahy13g2710 13 101457740 101460269 Ahy3g2394 3 100041346 100043871 hybridization