Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy13g2709 ATGGAAGGCATGAGATATGTCGTGGAGGTTGAGAAAGCGAGGGAAGCAACACAAGGTAAACCATCAATGGGTCCCGTTTACCGGGGCAAGTATCCGAATGATTCCACTACTCCTCCCATCGACGTTCTCAATAGCTGTTGGGACATTTTCCGATCGGCTTATGAGAAGTATCCAACAAATACAATGCTTGGTACCCGGGAAATTGAGAATGCAAAAGCTGGCAGGTACAAGTGGCAAACTTACAAAGAAGTGTATGAAGTGATACAGAAAGTTGGAAGCTCTATCCGCAGTTGTGGTTATGGGCAAGGAGTGAAATGCGGTATCTATGGTGCCAATTGCCCTGGGTGGATAATAAGCATGGAGGCCTGTAATGCTCATGGACTTTATTGTGTTCCTTTGTATGATACATTAGGTGCTGGAGCAGTGGAGTTTATTATATGCCATGCAGAAATCTCAATTGCTTTTGTAGAAGAAAAGAAGATATCTGAGCTATTGAAGACATTTCCAAATGCATCAAAGTTTCTCAAGACACTTGTGAGCTTTGGAAAGTTTACTCCAGTACAAAAGCAACAAGTTGAAAATTTGGGGGTGAAAAGCTATTCATGGGATGAATTTTTACAAGTGGGTGAAAATCAGAATTTTGATCTTCCTGTGATAAAAAAGAGTGACATCTGTACAATAATGTATACAAGTGGAACAACTGGTGACCCTAAGGGAGTCCTGTTATCCAATGAGTCCGTACTTACTGCGGTATCTGCGATACTGCAATTTCTAAGTAGTTGCAAACACTCTTTGCGGAACAAAGAAGTGTATATATCATATCTTCCCCTTGCTCATATCTTTGATAGGGTCATTGAGGAGGCAATGATATATGTTGGTGCCTCAATAGGATTCTGGCGTGGGGATGCCAGATTGTTACTTGAAGACGTTGCGGAGCTAAGACCAACTATTTTCTGTGCTGTTCCACGTGTGCTTGAAAGAGTGTACTCAGGCTTGCAAAATAAGATTTCTGCCGGGGGGTTTGTGAAGCAGACAATGTTCAATTTTGCTTACTCATACAAGTTGAATAATCTAATGAACGGAGTAGGCGTTGAGGACGCAGCTCCATTGTTTGACAGCCTTGTATTTAGCAAGATAAAACAAAGCTTAGGGGGTAGAGTACGAATTCTTTTGTCTGGAGGAGCACCACTAGCTAAACATGTGGAACTTTTTTTGCGGGTTGTGACTTGTTCTCTTGTCATACAAGGATATGGATTGACTGAAACGGGTGCGGCATCATTTGCCCAGCTATTAAACAACTTCGACATGCTTGGTACAGTGGGGGTTCCATTACCATATGTGGATGCATGCTTGGAATCTGTTCCTGACATGGGATATGATGCCCTTGCAAGCACACCAAGGGGAGAGGTATGTATAAGGGGTGGTACTTTGTGTTCAGGGTATCACAAAAGGGAAGATCTCACCAACGAGGCTATAATAGATGGATGGTTCCATACAGGGGATATTGGAGAGTGGCAACCAAATGGAAACTTGAAAATTATTGATCGGAAGAAGAATATATTTAAGCTTTCACAAGGAGAATATGTTGCTGTTGAACACCTGGAGAATGTTTATGGTCAAAGCTCTGTTCTTGAATCAATATGGGTCTATGGAAGCAGTTTCGAGGCCTACCTTGTTGCCGTGATTAACCCCAAGAAAGATGCACTTGAAAGGTGGGCGGAAGAAAATAATATAACCAAGGACTACAATTCTCTATGTGAAGATCCAAAGGCAAAAGCCTACGTGCTTGCAGAACTCGTAAATACTGCCAAGGCAAAAAAGTTGAAAGGTTTTGAGTTCATAAAAGCGATTCATCTTGACCCGGTTCCTTTTGACCAAGACCGTGACCTTATCACGCCAACATTTAAGAAGAAGAGACCTCAGATGCATAAATACTACAAGAATAATATTGACGAAATGTACAAGTCAATAAACAACAAAACCAGTGCGTAA 1992 0.4177 MEGMRYVVEVEKAREATQGKPSMGPVYRGKYPNDSTTPPIDVLNSCWDIFRSAYEKYPTNTMLGTREIENAKAGRYKWQTYKEVYEVIQKVGSSIRSCGYGQGVKCGIYGANCPGWIISMEACNAHGLYCVPLYDTLGAGAVEFIICHAEISIAFVEEKKISELLKTFPNASKFLKTLVSFGKFTPVQKQQVENLGVKSYSWDEFLQVGENQNFDLPVIKKSDICTIMYTSGTTGDPKGVLLSNESVLTAVSAILQFLSSCKHSLRNKEVYISYLPLAHIFDRVIEEAMIYVGASIGFWRGDARLLLEDVAELRPTIFCAVPRVLERVYSGLQNKISAGGFVKQTMFNFAYSYKLNNLMNGVGVEDAAPLFDSLVFSKIKQSLGGRVRILLSGGAPLAKHVELFLRVVTCSLVIQGYGLTETGAASFAQLLNNFDMLGTVGVPLPYVDACLESVPDMGYDALASTPRGEVCIRGGTLCSGYHKREDLTNEAIIDGWFHTGDIGEWQPNGNLKIIDRKKNIFKLSQGEYVAVEHLENVYGQSSVLESIWVYGSSFEAYLVAVINPKKDALERWAEENNITKDYNSLCEDPKAKAYVLAELVNTAKAKKLKGFEFIKAIHLDPVPFDQDRDLITPTFKKKRPQMHKYYKNNIDEMYKSINNKTSA* 664
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy13g2709 663 Pfam AMP-binding enzyme 69 524 IPR000873 -
Ahy13g2709 663 PANTHER LONG CHAIN ACYL-COA SYNTHETASE 4-LIKE 5 657 - -
Ahy13g2709 663 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 5 657 - -
Ahy13g2709 663 CDD LC-FACS_euk 74 655 IPR045311 GO:0004467|GO:0006631
Ahy13g2709 663 Gene3D - 42 516 IPR042099 -
Ahy13g2709 663 ProSitePatterns Putative AMP-binding domain signature. 227 238 IPR020845 -
Ahy13g2709 663 SUPERFAMILY Acetyl-CoA synthetase-like 39 655 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy13g2709 Ahy-Chr13 101445896 101455168 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy13g2709 5 656 Acyl Lipid Metabolism Gene Families AT4G11030 65.798 0.0 932
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy13g2709 K01897 - gmx:100811306 1016.91
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy13g2709 13 101445896 101455168 Ahy13g2709 13 101445896 101455168 ECH
Ahy13g2709 13 101445896 101455168 Ahy3g2393 3 100027907 100036867 hybridization
Ahy5g1532 5 40557116 40565205 Ahy13g2709 13 101445896 101455168 PCT