Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy13g2657 ATGGTGATGTTCGCTTCACAATTAACAGCAACAACCTTCTCGCCTTCATTCCTAATCTCAACTTCCTCCGATACCACTCGTTCTCCCTTCCTCGCTCTCGCTCACCTTTGCTACAACCGAACCTTCTTTCCCACTCGCCGGAGACTCGCCGTTTCCTCCCGCCTCAACTCGTCCAGGTCCTCCGGCGCCGGTGGCTCCGTCGACAACGGTGATGTGCCCTACGAGCTCCACCACGATTTCTCGCCGCAGCGCGAGACGAGGGGATCGCCGGTATTCGTGACGCTGCCGGTGAATACAGTGGGCCCTGAGGGGAAGATATCGAGGCCGAGGGCCATGATGTTCTCGCTGAAGGCGCTCGCCGCCGCGGGCGTGGAGGGCGTTGTGGTTGAGTTTTGGTGGGGAATTATTGAGAGGAAAGAACCTAGGGTTTACGATTGGCGAGGCTATCGTGAGCTCGTGATGATGGCTTGCATGTGTGGCCTCAAGGTTCGTGCTGTTCTTGCTTTCCATCAGTACGGCACAGGCCCTGATGATCCTAATCATTTGTCCCCTTTGTGTAGGATACCGCTTCCTCTATGGGTGCTTGATGAGATAAACAAAGATCCAGAGTTAGCATATTCTGACCGGTTTGGAAGAAGAAATATTGAATACATTTCCCTAGGATGTGATACTCTTCCTGTGCTGCGTGGACGCACTCCTATTCAAGCATATGCAGATTTTATGAGAGACTTCAGGGAGACTTTCAGGCCTTCTCTTGGCCTTACCATTACAAGGGTACAGATTGGCATGGGTCCTGGTGGTGAACTAAGATATCCGTCATTCTCTTTCCAGAAGCCAAATGTGGCTTCATCTGGTGGACTTGGAGAGTTCCAATGCTATGATAAGTACATGCTAGCTTCTCTAAATGCCTGTGCGAGAAAAATTGGAAAGCGTGAATGGGGAGATGGTGGTCCATTTGGTGCGGGAAGTTTGACGCAAAATCCTGAGCATACTGATTTCTTTAAAAATGAGGGTGGCTCTTGGAACACACCATATGGTAAATTTTTCCTTGAATGGTACTCAAATATGCTGCTGCTGCATGGAGAGAGAATTTGTAGGGAAGCTGAAACTATATTTAGGGGTACAGAAGTCCTTATATCTGCAGAAGTAGCTGCCATTCACTGGCACTACGCCATTCAATCCCATCCATCGGAGTTAACCGCAGGCTATTATAATACTTTCGACAGGGATGGATATTTGCCCATTGCTCGCCTGTTTAGTAAGTATGGGTTTGCAATTTGCTGCTCTTGTTTTGAAATGCAAGATGCCACAATGCAAAAGATAAACCCTAGTGGTAGCCCTGAAGGATTTCTTAAACAGCTTTTGCTGGCTGCTAGGCTTTGTGACATATCACTTGAAGGTCAAAATTTTACAACTGATTTAGATGATGATGCATTCTCCCAAGTGCTGAAGATGTCAAAGTTTTACTCGGATGGGATTGAAAAGCGGCCCTTTGCATTCAACTTTGTAAGAATGAACAAAAGAATGTTTGAAACCCAGAATTGGGATCGGTTTGCACGATTTGTGAGGCAGATGTCTAATGGAAAGATTTTTCAAGCCAGACTAAGAGCCCATTTGGGAAGTAGCAGAAGCTACTCTTTTTGA 1644 0.4732 MVMFASQLTATTFSPSFLISTSSDTTRSPFLALAHLCYNRTFFPTRRRLAVSSRLNSSRSSGAGGSVDNGDVPYELHHDFSPQRETRGSPVFVTLPVNTVGPEGKISRPRAMMFSLKALAAAGVEGVVVEFWWGIIERKEPRVYDWRGYRELVMMACMCGLKVRAVLAFHQYGTGPDDPNHLSPLCRIPLPLWVLDEINKDPELAYSDRFGRRNIEYISLGCDTLPVLRGRTPIQAYADFMRDFRETFRPSLGLTITRVQIGMGPGGELRYPSFSFQKPNVASSGGLGEFQCYDKYMLASLNACARKIGKREWGDGGPFGAGSLTQNPEHTDFFKNEGGSWNTPYGKFFLEWYSNMLLLHGERICREAETIFRGTEVLISAEVAAIHWHYAIQSHPSELTAGYYNTFDRDGYLPIARLFSKYGFAICCSCFEMQDATMQKINPSGSPEGFLKQLLLAARLCDISLEGQNFTTDLDDDAFSQVLKMSKFYSDGIEKRPFAFNFVRMNKRMFETQNWDRFARFVRQMSNGKIFQARLRAHLGSSRSYSF* 548
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy13g2657 547 Pfam Glycosyl hydrolase family 14 92 521 IPR001554 GO:0000272|GO:0016161
Ahy13g2657 547 PANTHER - 35 540 IPR001554 GO:0000272|GO:0016161
Ahy13g2657 547 SUPERFAMILY (Trans)glycosidases 88 534 IPR017853 -
Ahy13g2657 547 PANTHER BETA-AMYLASE 35 540 - -
Ahy13g2657 547 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 394 405 IPR001554 GO:0000272|GO:0016161
Ahy13g2657 547 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 144 162 IPR001554 GO:0000272|GO:0016161
Ahy13g2657 547 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 123 137 IPR001554 GO:0000272|GO:0016161
Ahy13g2657 547 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 264 286 IPR001554 GO:0000272|GO:0016161
Ahy13g2657 547 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 341 360 IPR001554 GO:0000272|GO:0016161
Ahy13g2657 547 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 412 435 IPR001554 GO:0000272|GO:0016161
Ahy13g2657 547 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 377 393 IPR001554 GO:0000272|GO:0016161
Ahy13g2657 547 Gene3D Glycosidases 81 543 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy13g2657 Ahy-Chr13 94612441 94615903 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy13g2657 90 528 Glycoside Hydrolase AT4G17090 50.455 4.97e-156 455
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy13g2657 K01177 - gmx:100805981 804.668
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy13g2657 13 94612441 94615903 Ahy13g2657 13 94612441 94615903 ECH