Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy13g2653 ATGACTGGCTCGTGGGCTCGCGGGTCTCTCATTGTTCTCGCCATCGTTTCCCTCGGATGTATGTTTGCAATTTCCATTGCAAAAGAGGAAGCAACCAAGTTGGGTACAGTTATTGGGATAGATCTTGGAACAACTTATTCTTGTGTTGGTGTTTATAAGAATGGCCATGTTGAGATCATAGCCAATGACCAGGGTAACCGTATCACCCCATCATGGGTTGCTTTCACCGACAGCGAGAGACTGATCGGGGAGGCTGCCAAGAATCAGGCAGCTGTCAACCCCGAAAGGACCATCTTTGATGTCAAGAGGCTTATTGGAAGAAAGTTTGAAGATAAGGAAGTCCAAAGAGACATGAAGCTTGTGCCATATAAGATTGTGAACAAGGATGGGAAACCTTACATACAGGTAAAGATTAAAGATGGTGAGACCAAGGTGTTCAGCCCTGAGGAAATCAGTGCCATGATTTTGACTAAGATGAAGGAAACAGCTGAAGCATTCCTTGGAAAGAAAATCCATGATGCAGTTGTCACTGTCCCTGCTTACTTCAATGATGCTCAGAGGCAGGCCACCAAGGATGCTGGTGTTATTGCCGGTCTGAATGTGGCTAGGATTATTAATGAGCCCACTGCCGCTGCAATTGCGTATGGATTGGACAAGAAAGGTGGCGAGAAGAACATCCTTGTCTTTGATCTTGGTGGTGGGACTTTTGATGTCAGTATTTTGACGATCGATAATGGTGTTTTCGAGGTCCTTGCTACAAACGGAGATACTCATCTTGGAGGTGAGGACTTTGATCAGAGAATAATGGAATACTTCATTAAATTGATCAAGAAAAAGCATGGAAAGGACATTAGCAAGGACAACAGAGCACTTGGCAAGCTCAGGAGAGAGGCTGAGCGTGCCAAGAGAGCTCTCAGCAGCCAGCACCAGGTCCGAGTGGAAATTGAATCACTTTTCGATGGTGTTGATTTCTCCGAACCACTTACCCGAGCTCGGTTTGAGGAGTTGAACAACGATTTATTCCGTAAGACAATGGGGCCTGTGAAGAAAGCAATGGAAGATGCTGGATTACAAAAGAGCCAGATCGATGAGATTGTTCTTGTTGGTGGAAGCACAAGGATTCCAAAGGTGCAACAGCTTTTGAAGGACTACTTTGATGGAAAGGAGCCCAACAAGGGTGTCAACCCTGATGAGGCAGTTGCCTATGGTGCTGCAGTCCAAGGAAGCATTTTGAGCGGAGAGGGAGGTGATGAAACCAAAGATATCCTTCTCTTGGATGTTGCTCCACTCACCCTTGGAATTGAGACTGTTGGTGGGGTGATGACAAAGTTGATTCCCAGAAACACAGTTATCCCTACCAAGAAATCTCAGGTGTTTACTACCTACCAGGATCAGCAGACTACTGTCTCCATTCAGGTATTTGAAGGTGAGAGGAGTCTTACAAAGGATTGCCGACTGCTTGGGAAATTTGATCTGTCTGGAATTCCACCAGCTCCAAGGGGTACCCCTCAAATTGAAGTGACCTTTGAAGTTGATGCAAATGGCATCTTAAACGTCAAAGCAGAAGACAAGGGCACTGGTAAATCAGAAAAGATCACCATTACAAATGAGAAGGGACGCCTGAGCCAGGAGGAAATTGAGCGAATGGTTCGCGAAGCAGAGGAGTTTGCCGAGGAAGACAAGAAGGTCAAGGAGAGAATTGATGCCCGCAATGCTCTTGAAACTTATGTTTACAACATGAAGAACCAGATCAGTGACAAAGACAAGCTGGCCGACAAGTTGGAATCCGATGAAAAGGATAAAATCGAGGCTGCAGTGAAGGAAGCGTTGGAATGGCTTGACGACAATCAGACAGTGGAGAAAGAAGATTATGAAGAGAAGCTGAAAGAGGTTGAAGCTGTTTGCAATCCAATTATCACCGCGGTCTATCAGAGGTCAGGTGGGACTCCTGGTGGTGGTGCTTCTGGAGAGGACGAGGATGATTCTCACGATGAACTCTAG 2001 0.4603 MTGSWARGSLIVLAIVSLGCMFAISIAKEEATKLGTVIGIDLGTTYSCVGVYKNGHVEIIANDQGNRITPSWVAFTDSERLIGEAAKNQAAVNPERTIFDVKRLIGRKFEDKEVQRDMKLVPYKIVNKDGKPYIQVKIKDGETKVFSPEEISAMILTKMKETAEAFLGKKIHDAVVTVPAYFNDAQRQATKDAGVIAGLNVARIINEPTAAAIAYGLDKKGGEKNILVFDLGGGTFDVSILTIDNGVFEVLATNGDTHLGGEDFDQRIMEYFIKLIKKKHGKDISKDNRALGKLRREAERAKRALSSQHQVRVEIESLFDGVDFSEPLTRARFEELNNDLFRKTMGPVKKAMEDAGLQKSQIDEIVLVGGSTRIPKVQQLLKDYFDGKEPNKGVNPDEAVAYGAAVQGSILSGEGGDETKDILLLDVAPLTLGIETVGGVMTKLIPRNTVIPTKKSQVFTTYQDQQTTVSIQVFEGERSLTKDCRLLGKFDLSGIPPAPRGTPQIEVTFEVDANGILNVKAEDKGTGKSEKITITNEKGRLSQEEIERMVREAEEFAEEDKKVKERIDARNALETYVYNMKNQISDKDKLADKLESDEKDKIEAAVKEALEWLDDNQTVEKEDYEEKLKEVEAVCNPIITAVYQRSGGTPGGGASGEDEDDSHDEL* 667
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy13g2653 666 Pfam Hsp70 protein 37 644 IPR013126 GO:0005524|GO:0140662
Ahy13g2653 666 PANTHER HEAT SHOCK PROTEIN 70KDA 22 652 IPR013126 GO:0005524|GO:0140662
Ahy13g2653 666 SUPERFAMILY Heat shock protein 70kD (HSP70), C-terminal subdomain 568 651 IPR029048 -
Ahy13g2653 666 CDD HSPA5-like_NBD 35 409 IPR042050 -
Ahy13g2653 666 Gene3D - 38 409 - -
Ahy13g2653 666 ProSitePatterns Heat shock hsp70 proteins family signature 1. 40 47 IPR018181 -
Ahy13g2653 666 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 20 - -
Ahy13g2653 666 PRINTS 70kDa heat shock protein signature 234 244 - -
Ahy13g2653 666 PRINTS 70kDa heat shock protein signature 421 440 - -
Ahy13g2653 666 PRINTS 70kDa heat shock protein signature 502 518 - -
Ahy13g2653 666 PRINTS 70kDa heat shock protein signature 64 76 - -
Ahy13g2653 666 PRINTS 70kDa heat shock protein signature 362 378 - -
Ahy13g2653 666 PRINTS 70kDa heat shock protein signature 86 94 - -
Ahy13g2653 666 PRINTS 70kDa heat shock protein signature 174 194 - -
Ahy13g2653 666 PRINTS 70kDa heat shock protein signature 394 414 - -
Ahy13g2653 666 PRINTS 70kDa heat shock protein signature 36 49 - -
Ahy13g2653 666 Coils Coil 614 634 - -
Ahy13g2653 666 ProSitePatterns Heat shock hsp70 proteins family signature 3. 365 379 IPR018181 -
Ahy13g2653 666 SUPERFAMILY Actin-like ATPase domain 35 219 IPR043129 -
Ahy13g2653 666 PANTHER LUMINAL-BINDING PROTEIN 22 652 - -
Ahy13g2653 666 Coils Coil 546 566 - -
Ahy13g2653 666 Gene3D - 571 645 IPR029048 -
Ahy13g2653 666 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 416 570 IPR029047 -
Ahy13g2653 666 MobiDBLite consensus disorder prediction 642 666 - -
Ahy13g2653 666 Gene3D Actin; Chain A, domain 4 260 343 - -
Ahy13g2653 666 Gene3D - 220 394 - -
Ahy13g2653 666 SUPERFAMILY Actin-like ATPase domain 222 413 IPR043129 -
Ahy13g2653 666 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 418 574 IPR029047 -
Ahy13g2653 666 Coils Coil 284 304 - -
Ahy13g2653 666 ProSitePatterns Heat shock hsp70 proteins family signature 2. 228 241 IPR018181 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy13g2653 Ahy-Chr13 94251466 94255005 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy13g2653 1 646 Miscellaneous Gene Families AT5G28540 92.260 0.0 1222
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy13g2653 K09490 - gmx:547839 1231.08
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy13g2653 13 94251466 94255005 Ahy13g2653 13 94251466 94255005 ECH