Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy13g2651 ATGCTGGAAACAGTTAAATACCTGATAGGGTCGCCGGGTCCAAGCGGGTTCGGGTCCAAGTCCAACGCCGAACAAGTCACGGAAAACTCCGATCTGCGCTCACTCACGGCCATTATTACCGGTGCCACGTCAGGAATAGGAGCTGAAACGGCAAGGGTTCTGGCGAAACGAGGAGCGAGGCTGGTTCTGCCAGCGCGGAGCCTGAAAGCCGCGGAAGATACAAAGGCTCGCATAGTATCGGAGTTTCCAGATGCTGACGTCATGGTTATGCCGCTCGACCTCAGTTCTCTCACTTCTGTTAGGAACTTCGTGGCTCACTTCCACTCTCTCCGTTTGCCCCTCAATCTCCTCATAAACAACGCTGGCAAGTTTGCACATGAGCATGCCATCTCGGAGGATGGCCTTGAAATGACCTTCGCCACTAATTATCTAGGTCATTTTTTGTTAACAAAGCTTTTATTGAAGACGATGATCGAGACGGCAGAGAAGACAGGGGTGCAAGGGAGGATAGTGAACGTGTCGTCGAGCATCCACGCTTGGTTTTCCGGTGATGTCATCTCATATTTAGCCTCTATTAGCCGCAACAACAAAAGCCATTACGACGCCACACGTGCTTATGCTCTTTCCAAGCTCGCCAACGTCTTCCACACCAACCAACTTGCTCGCAAGCTCCAGCAAATGGGGGCGAACGTGACAGTGAACTGTGTGCACCCGGGGATCGTGAGAACCAGACTCACTAGAGAGCGTGAGGGATTACTCACAGATATAGTTTTCTTTTTGGCTTCCAAGCTCTTAAAGACCATTCCACAGGCAGCAGCAACAACATGCTATGTGGCGACCCACCCAAGGTTGCATAACGTGAGTGGCAAGTACTTTGCAGATTGTAACGAGGCTGTAACATCAAAGTTGGGATCCAACTCAACCCAAGCTTCAAGGTTATGGGCCGTTTCTGAATTCATGCTCACCAGGGGTCCTAAAGCTGCCTTTGACCTACTCAATCACCTTCACTTTTGA 1014 0.5059 MLETVKYLIGSPGPSGFGSKSNAEQVTENSDLRSLTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEDTKARIVSEFPDADVMVMPLDLSSLTSVRNFVAHFHSLRLPLNLLINNAGKFAHEHAISEDGLEMTFATNYLGHFLLTKLLLKTMIETAEKTGVQGRIVNVSSSIHAWFSGDVISYLASISRNNKSHYDATRAYALSKLANVFHTNQLARKLQQMGANVTVNCVHPGIVRTRLTREREGLLTDIVFFLASKLLKTIPQAAATTCYVATHPRLHNVSGKYFADCNEAVTSKLGSNSTQASRLWAVSEFMLTRGPKAAFDLLNHLHF* 338
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy13g2651 337 Gene3D - 22 323 - -
Ahy13g2651 337 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 168 176 IPR002347 -
Ahy13g2651 337 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 112 123 IPR002347 -
Ahy13g2651 337 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 206 225 IPR002347 -
Ahy13g2651 337 PANTHER MITOCHONDRIAL PYRUVATE CARRIER 4 325 - -
Ahy13g2651 337 PANTHER RETINOL DEHYDROGENASE 4 325 - -
Ahy13g2651 337 PRINTS Glucose/ribitol dehydrogenase family signature 162 178 IPR002347 -
Ahy13g2651 337 PRINTS Glucose/ribitol dehydrogenase family signature 206 225 IPR002347 -
Ahy13g2651 337 PRINTS Glucose/ribitol dehydrogenase family signature 36 53 IPR002347 -
Ahy13g2651 337 PRINTS Glucose/ribitol dehydrogenase family signature 112 123 IPR002347 -
Ahy13g2651 337 PRINTS Glucose/ribitol dehydrogenase family signature 229 246 IPR002347 -
Ahy13g2651 337 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 36 299 IPR036291 -
Ahy13g2651 337 Pfam short chain dehydrogenase 193 249 IPR002347 -
Ahy13g2651 337 Pfam short chain dehydrogenase 36 191 IPR002347 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy13g2651 Ahy-Chr13 93553927 93556497 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy13g2651 32 292 Acyl Lipid Metabolism Gene Families AT1G24360 27.402 8.17e-12 63.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy13g2651 - - gmx:100794347 546.199
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy13g2651 13 93553927 93556497 Ahy13g2651 13 93553927 93556497 ECH