Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy13g2509 ATGGCAAACGAGCAAACAATGAAGCCGGTAGCCACGCTGCTTTTGGGGCTGAACTTCTGCATGTACGTCATAGTTTTGGGTATTGGTGGATGGGCCATGAACAGAGCTATAGATCATGGTTTTGTCATAGGTGCAGGACTTGAACTTCCAGCACATTTTTCACCAATACAGTTCCCAATGGGAAATGCAGCCACTGGGTTCTTTGTGACATTTGCTTTGATAGCTGGAGTTGTTGGCGTTGGATCAGTCATCTCAGGAATCAATCACATCCGATCATGGACTTCAGAGAGCTTGCCATCTGCGGCTTCCGTTGCCACCATTGCATGGACCCTCACACTTCTTGCCATGGGCTTTGCTTGCAAAGAGATTGAGCTAAACATCAGAAATGCCCGCCTGAAAACAATGGAGGCTTTTCTAATTATCCTTTCAGCTACACAGCTTTTCTACATTGCTGCTATTCATGGTGCTGCTTCATTGAGGAGATAA 486 0.4609 MANEQTMKPVATLLLGLNFCMYVIVLGIGGWAMNRAIDHGFVIGAGLELPAHFSPIQFPMGNAATGFFVTFALIAGVVGVGSVISGINHIRSWTSESLPSAASVATIAWTLTLLAMGFACKEIELNIRNARLKTMEAFLIILSATQLFYIAAIHGAASLRR* 162
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy13g2509 161 PANTHER AWPM-19-LIKE FAMILY PROTEIN 1 161 IPR008390 -
Ahy13g2509 161 Pfam AWPM-19-like family 17 156 IPR008390 -
Ahy13g2509 161 PANTHER ABA INDUCED PLASMA MEMBRANE PROTEIN 1 161 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy13g2509 Ahy-Chr13 70041476 70043542 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy13g2509 4 155 Miscellaneous Gene Families AT5G46530 76.974 3.60e-85 245
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy13g2509 - - gmx:100527291 283.878