Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy13g2466 ATGGAGCCTCAGCCTGAGGAGGCTGTTGCACGCCTTGAGGAGTTGCAAAAGTCAATTGAGGCAAAGATGACATTACGACAAAGCAATTTGAATCCTGATAGGCCTGACTCAGGATTTTTAAGGACTCTGGATTCAAGCATTAAGCGCAATACTGCAGTCATTAAGAAACTGAAGCAGATTAATGAAGAGCAGCGTGAAACACTGATGGACGAGTTGCGCAGTGTCAACTTAAGCAAATTTGTCAGTGAAGCTGTGACTGCTATATGTGATGCCAAGCTTAGAAGCTCAGATATACAAGCAGCAGTTCAGGTCTGCTCTTTGCTTCATCAGAGGTACAAGGACTTTGCCCCATGCCTGATTCAAGGACTTCTCAAAGTTTTCTCTCCAGGAAAGCCTGGGGATGAGTCAGATGCAGACAGAAACTTGAAGGCAATGAAGAAACGCAGTACTTTGAAACTTCTATTGGAGCTTTATTTTGTTGGAGTTATTGATGATGGCAACATTTTCATGAATATCATAAAAGATCTAACTGGTATGGATCAGCTAAAAGACCGAGATGCAGCACAAACTAGTTTGACCCTTCTTTCTAGCTTTGCCCGACAAGGGAGAATCTTTCTGGGACTTCCTGTTTCTGGTCCAGAAATTCATGAAGAGTTTTTTAAAGGCCTTAACATTACGGCAGATCAAAAGAAAGTTTTCAGGAAAGCATGTTATGCATTTTATGATGCTGCAGCAGAACTACTTCAGTCTGAGCATTCTTCACTTCGACTAATGGAGCATGAAAATTCTAAGATTCTTAACGCAAAAGGAGAGCTCAGTGATGAAAATATTGCTTCATATGAAAAGCTTCGGAAATCTTATGACCATTTGTATCGTAACATCTCATCATTGGCAGAGGCACTTGATATGCAACCTCCAGTAATGCCAGAAGATGGTCACACAACAAGAGTTACTACTGGTGAGGAAGCTACATCTGCGGGTGGGAAAGATTCTTCTATAGCTGAACCTGTATGGGATGATGAAGATACAAGGGCTTTCTATGAATGTTTACCCGACCTAAGAGCTTTTGTTCCTGCTGTGCTTTTGGGCGAAGCAGAGCCAAAAACAAGTGAGCAATCAGTGAAGAGTCAAGACCAACCAACTGAAATAGTACCTGAATCTGACAAAGGTCAACTGGGCAACCATGACAGTGGAGATGCATCGGCAGAATCTATTGCTTTGCCAGAGGGAGGAAGTGCAGAAAAAGCGAAGGATAAGGAAGAAAGAGAAAAATCAAAAGAATTGGAAAGAGAGAAGGAGAAAGAAAAAGACAATGACAAAAAGGGGGAAAATGAAAAGGACAAACTCAGAAGCCTTGAGGGGACAAATTTGGATGCTTTATTGCAAAGACTTCCTGGTTGTGTGAGCCGGGACCTTATAGATCAATTGACTGTAGAATTCTGTTATCTAAATTCAAAATCAAATCGGAAAAAACTTGTGAGGGCTTTGTTCAATGTACCAAGGACATCTCTGGAGCTGCTACCATATTACTCACGCATGGTTGCTACACTCTCAACTTGTATGAAGGATGTCTCCTCCATTCTTTTGCAGATGTTGGAGGAGGAATTCAACTTCTTAATAAATAAGAAGGACCAGATGAATATTGAGACAAAGATAAGGAACATCAGGTTCATAGGAGAACTTTGCAAGTTCAAAATTGCCCCTGCTGGCCTAGTCTTTAGTTGTTTGAAGGCCTGTTTAGATGATTTTACTCATCACAACATTGATGTAGCTTGCAATCTTCTTGAAACATGTGGCCGTTTTCTATACCGGTCACCAGAAACTACTATACGTATGACGAACATGTTAGAGATACTGATGCGCTTGAAAAATGTGAAGAACTTAGATCCAAGACATAGCACTTTGGTGGAAAATGCATATTACCTTTGTAAGCCTCCAGAAAGATCTGCACGAGTGGCTAAAGTCCGTCCACCATTGCATCAGTATATCAGAAAATTACTTTTCTCTGATCTGGATAAGTCTACCATTGAGCATGTGTTGAGGCAACTTAGAAAATTACCATGGAGTGAATGTGAACCATATCTTTTGAAATGTTTCCTGAAGGTCTATAAAGGGAAATATGGCCAGATCCATCTGATTGCTTCTCTTGCTGCTGGTTTAAGTCGCTACCATGATGAGTTTGCAGTGGCTATAGTTGATGAGGTTTTGGAGGAGATTAGAGTTGGGCTGGAACTAAATGACTATGGGATGCAGCAAAGACGCATTGCCTACATGAGATTCTTAGGGGAGCTTTACAACTATGAGCATGTGGATTCATCTGTTATTTTTGAGACACTATATCTTATCGTCATCTATGGCCATGGGACACCAGAGCAAGATGCACTGGATCCACCTGAAGATTGTTTTCGTATAAGATTGATCATTACTCTTCTTGAAACCTGTGGACATTACTTTGATCGTGGCTCTTCAAAGAGGAAACTTGATCGATTCCTTATACACTTCCAGAGGTATATTTTAAGCAAAGGTGCACTGCCTCTCGACATTGAATTTGACTTGCAGGATCTGTTTGCGGAGTTGCGCCCCAATATGGTTAGATATACATCTGTTGATGAAGTGAATGCAGCTCTAGTAGAACTTGAAGAACATGATCGGATGGTTTCTGCTGATAAGGCCAGTAGTGAAAAACATTCTGATACTGAGAAGCCTTTGAGTAGGACTAGTTCTAACACAGTGGTAAGCAATGGACAACGCATTGATAATGGTGCAGAAGAGAATGGAGTGCAAGATGATGTTAATGACAGTGACACTGACTCAGGGAGTGGCACCATTGATGCGGAGGGACATGATGATGAAGAGTTGGATGATGAGAATCATGACGATGGATGTGAGACTGAGGATGATGATGATGATGATGATGATGGGCCTGGACCTGCTTCTGATGAGGAAGACGAAGTCCATGTGAGACAAAAGGTGACAGAGGTGGACCCTCTGGAGGAAGCCAATTTTGAACAGGAGCTGAAGGCTGTGTTACAGGAGAGTATGGAACAGCGAAGGCAGGAGCTACGAGGCCGTCCTACATTGAACATGATGATTCCAATGAATGTATTTGAGGGATCCACTAAGGATCATCATGGGAGAGGAGTTGGTGGTGAAAGTGGTGATGAGGCATTGAGTGAGGAGACCGGTGGAAACAAAGAGGTTCAAGTGAGAGTTCTTGTGAAGCGTGGGAACAAGCAGCAAACAAAACAGATGTACATCCCACGGGATTCCTCACTGGTTCTGAGTACAAAACAGAAAGAAGCAGCTGAGCTTCAAGAGAAAGAAGACATTAAGAGGCTTGTCTTGGAGTATAATGATAGAGAAGAGGAGGAGCTTAATGGACTAGGGTCCCAACCAACAAATTGGATGTTGAGTGGCGGCAACAGGACTGGTGGCCGTGGCAACACTTTGGAAGGAACCAGCAGTAGGAGTGGCGGACGGCATCGGCATCACAATTATACTGGCAGTGGCATCTACTACGGCAGGAGGAGGTAA 3534 0.4267 MEPQPEEAVARLEELQKSIEAKMTLRQSNLNPDRPDSGFLRTLDSSIKRNTAVIKKLKQINEEQRETLMDELRSVNLSKFVSEAVTAICDAKLRSSDIQAAVQVCSLLHQRYKDFAPCLIQGLLKVFSPGKPGDESDADRNLKAMKKRSTLKLLLELYFVGVIDDGNIFMNIIKDLTGMDQLKDRDAAQTSLTLLSSFARQGRIFLGLPVSGPEIHEEFFKGLNITADQKKVFRKACYAFYDAAAELLQSEHSSLRLMEHENSKILNAKGELSDENIASYEKLRKSYDHLYRNISSLAEALDMQPPVMPEDGHTTRVTTGEEATSAGGKDSSIAEPVWDDEDTRAFYECLPDLRAFVPAVLLGEAEPKTSEQSVKSQDQPTEIVPESDKGQLGNHDSGDASAESIALPEGGSAEKAKDKEEREKSKELEREKEKEKDNDKKGENEKDKLRSLEGTNLDALLQRLPGCVSRDLIDQLTVEFCYLNSKSNRKKLVRALFNVPRTSLELLPYYSRMVATLSTCMKDVSSILLQMLEEEFNFLINKKDQMNIETKIRNIRFIGELCKFKIAPAGLVFSCLKACLDDFTHHNIDVACNLLETCGRFLYRSPETTIRMTNMLEILMRLKNVKNLDPRHSTLVENAYYLCKPPERSARVAKVRPPLHQYIRKLLFSDLDKSTIEHVLRQLRKLPWSECEPYLLKCFLKVYKGKYGQIHLIASLAAGLSRYHDEFAVAIVDEVLEEIRVGLELNDYGMQQRRIAYMRFLGELYNYEHVDSSVIFETLYLIVIYGHGTPEQDALDPPEDCFRIRLIITLLETCGHYFDRGSSKRKLDRFLIHFQRYILSKGALPLDIEFDLQDLFAELRPNMVRYTSVDEVNAALVELEEHDRMVSADKASSEKHSDTEKPLSRTSSNTVVSNGQRIDNGAEENGVQDDVNDSDTDSGSGTIDAEGHDDEELDDENHDDGCETEDDDDDDDDGPGPASDEEDEVHVRQKVTEVDPLEEANFEQELKAVLQESMEQRRQELRGRPTLNMMIPMNVFEGSTKDHHGRGVGGESGDEALSEETGGNKEVQVRVLVKRGNKQQTKQMYIPRDSSLVLSTKQKEAAELQEKEDIKRLVLEYNDREEEELNGLGSQPTNWMLSGGNRTGGRGNTLEGTSSRSGGRHRHHNYTGSGIYYGRRR* 1178
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy13g2466 1177 MobiDBLite consensus disorder prediction 903 921 - -
Ahy13g2466 1177 Pfam MIF4G domain 461 645 IPR003890 GO:0003723|GO:0005515
Ahy13g2466 1177 Pfam MIF4G domain 663 857 IPR003890 GO:0003723|GO:0005515
Ahy13g2466 1177 MobiDBLite consensus disorder prediction 885 902 - -
Ahy13g2466 1177 PANTHER NONSENSE-MEDIATED MRNA DECAY PROTEIN 2 UP-FRAMESHIFT SUPPRESSOR 2 7 1176 IPR039762 GO:0000184
Ahy13g2466 1177 SUPERFAMILY ARM repeat 455 649 IPR016024 -
Ahy13g2466 1177 Coils Coil 416 445 - -
Ahy13g2466 1177 Coils Coil 529 549 - -
Ahy13g2466 1177 SUPERFAMILY ARM repeat 64 176 IPR016024 -
Ahy13g2466 1177 MobiDBLite consensus disorder prediction 1124 1177 - -
Ahy13g2466 1177 SMART if4_15 458 646 IPR003890 GO:0003723|GO:0005515
Ahy13g2466 1177 SMART if4_15 661 862 IPR003890 GO:0003723|GO:0005515
Ahy13g2466 1177 SMART if4_15 47 269 IPR003890 GO:0003723|GO:0005515
Ahy13g2466 1177 MobiDBLite consensus disorder prediction 980 999 - -
Ahy13g2466 1177 MobiDBLite consensus disorder prediction 885 999 - -
Ahy13g2466 1177 SUPERFAMILY ARM repeat 656 881 IPR016024 -
Ahy13g2466 1177 MobiDBLite consensus disorder prediction 1127 1155 - -
Ahy13g2466 1177 Gene3D - 656 886 - -
Ahy13g2466 1177 MobiDBLite consensus disorder prediction 412 449 - -
Ahy13g2466 1177 MobiDBLite consensus disorder prediction 947 979 - -
Ahy13g2466 1177 Gene3D - 1070 1094 - -
Ahy13g2466 1177 Pfam Up-frameshift suppressor 2 980 1116 IPR007193 -
Ahy13g2466 1177 PANTHER - 7 1176 - -
Ahy13g2466 1177 MobiDBLite consensus disorder prediction 302 335 - -
Ahy13g2466 1177 MobiDBLite consensus disorder prediction 366 449 - -
Ahy13g2466 1177 Gene3D - 418 654 - -
Ahy13g2466 1177 MobiDBLite consensus disorder prediction 1039 1063 - -
Ahy13g2466 1177 Gene3D - 2 309 - -
Ahy13g2466 1177 MobiDBLite consensus disorder prediction 369 384 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy13g2466 Ahy-Chr13 59974833 59992932 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy13g2466 K14327 - gmx:100786092 2020.74