Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy13g2441 ATGGAGGATAAGGCTTCATCATCATCATCATCATCATCATCATCATCATCATCGGAAAAATCCAAAACTGCAGTTTTGGACGTTCCCCTTCATTTATTTGGGTTTGAATTTGAAGATATAACACCCCAAAGAATTTCCGGCCGTTTCATTGTTACCGAGAAATGCTGCCAGCCATTTAAGGTGCTTCATGGAGGGGTATCAGCACTGATAGCAGAGTCACTAGCAAGCATGGGAGCACACATAGCTTCTGGTTTTCAAAGGGTAGCTGGAATTCAACTTAGCATCAACCATGTCAAACGAGCAGAACTTGGTGAATTGGTCCACGCCCAAGCTACCCCTTTGAATCTTGGCAAAACCATTCAGGTATGGGATGTGAGAATGTGGAAAATTGATCCGTCAAATTCAAGAAACAAAGCTTTGGTATCATCTTCTAGAGTAACTCTACTGTGCAACATGCCAGTACCAGAAAATGCAAAAGATGCTGCAGAAATGCTAAAGAAGCATGCAAAACTATAA 516 0.4167 MEDKASSSSSSSSSSSSSEKSKTAVLDVPLHLFGFEFEDITPQRISGRFIVTEKCCQPFKVLHGGVSALIAESLASMGAHIASGFQRVAGIQLSINHVKRAELGELVHAQATPLNLGKTIQVWDVRMWKIDPSNSRNKALVSSSRVTLLCNMPVPENAKDAAEMLKKHAKL* 172
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy13g2441 171 TIGRFAM unchar_dom_1: uncharacterized domain 1 32 127 IPR003736 -
Ahy13g2441 171 PANTHER 1,4-DIHYDROXY-2-NAPHTHOYL-COA THIOESTERASE 1 11 171 - -
Ahy13g2441 171 Pfam Thioesterase superfamily 60 131 IPR006683 -
Ahy13g2441 171 CDD PaaI_thioesterase 32 147 - -
Ahy13g2441 171 PANTHER 1,4-DIHYDROXY-2-NAPHTHOYL-COA THIOESTERASE 1 11 171 - -
Ahy13g2441 171 Gene3D Hotdog Thioesterase 13 151 - -
Ahy13g2441 171 SUPERFAMILY Thioesterase/thiol ester dehydrase-isomerase 31 148 IPR029069 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy13g2441 Ahy-Chr13 56792096 56794007 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy13g2441 K19222 - gmx:100527403 244.202
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy13g2441 13 56792096 56794007 Ahy3g2195 3 70428470 70430447 hybridization