Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy13g2375 ATGATCGGAAAGTTGTCGGAGTTGTTAGTCGCCGGAGGCCGCGCCTCTGCAGTTTTGGACACCATAGGGAGTCCAAGAAGCCCTTTGGACATGAACTTGAAGATGCAATCATCATCACCAAAGGGCTTAAAGAGCTATGACCTTGGTGGTGTTGGCCTAGCAATTGTGATGGCACTTGACAAATCCAATTATAACAAAGAAGGTAGTGAGATTTTGCCAAAACATGCCGTTTCTGTTTGTACTACACCAAACAACATGAACCGGTACCGGTCTAGGCCAATCCCGGTTCATAACGAAAAACAACACCAAGATCATCATGAGACTGATGTTCCAAACTCCGAAGATTACACATATGTGACGTATCATATACCTAATAACAAGACCATCACTAAGGTTTACTATGATGGCGGTGAAGAAGGTGCGAATCTAAGACATGGTTACAGGATTAACGACAACAACAACAACTACTTTGGCGTTGGTAGAACAACAACAACAACCACCACCACCCCACCAACACAAAATTTGGTTGTTGAAGGTGAAGCGTCGTTTCCCACATCGGATTTTCTCAGTTCATGTCACCTTTGCAGAAAGAAACTCCATGGCAAAGACATATACATGTACAGAGGAGAGAAAGGATTTTGTAGCCCAGAGTGCCGTTCAAGGCAGATAATGATTGATGAGAGGAAAGAGCTTTGTAGATCAGAAGCTTCAAGATCTGTGGAACTCTCAAGTTCACCATACACAAGGGACCAAATGTTTTCAACTGGGATTATTGCCCTTTAA 783 0.433 MIGKLSELLVAGGRASAVLDTIGSPRSPLDMNLKMQSSSPKGLKSYDLGGVGLAIVMALDKSNYNKEGSEILPKHAVSVCTTPNNMNRYRSRPIPVHNEKQHQDHHETDVPNSEDYTYVTYHIPNNKTITKVYYDGGEEGANLRHGYRINDNNNNYFGVGRTTTTTTTTPPTQNLVVEGEASFPTSDFLSSCHLCRKKLHGKDIYMYRGEKGFCSPECRSRQIMIDERKELCRSEASRSVELSSSPYTRDQMFSTGIIAL* 261
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy13g2375 260 ProSiteProfiles Zinc finger FLZ-type profile. 187 230 IPR007650 -
Ahy13g2375 260 PANTHER DUF581 FAMILY PROTEIN 2 260 - -
Ahy13g2375 260 Pfam zinc-finger of the FCS-type, C2-C2 181 229 IPR007650 -
Ahy13g2375 260 PANTHER OS02G0174800 PROTEIN 2 260 IPR044604 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy13g2375 Ahy-Chr13 52571020 52572459 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy13g2375 - - gmx:100801983 308.531
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy13g2375 13 52571020 52572459 Ahy13g2375 13 52571020 52572459 ECH
Ahy13g2375 13 52571020 52572459 Ahy3g2086 3 50919080 50920470 hybridization
Ahy1g1758 1 93860074 93861288 Ahy13g2375 13 52571020 52572459 PCT
Ahy13g2375 13 52571020 52572459 Ahy1g1758 1 93860074 93861288 PCT