Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy13g2357 ATGGGTTCGGAGGACAAAGGGTTGGGGTTCTTTAAGGAGATCGGTTTGGCTTCCAACAATATTGGCTCTTACATTAACGGCCAATGGAAGGCCAACGGTTCTTCAACCACTTCTCTTAATCCTTCTAACAATCAGGCTATTGCTCAAGTGACCGAACCAACTTTGCAAGATTATGAGGAGGGATTGAATGCTTGCAATGAAGCAGCTAAAATATGGATGACAGTTCCAGCGCCTAAGAGAGGTGAGATTGTAAGACAGATTGGTGAAGCATTAAGGGCTAAGTTGGAGCCTCTTGGTAAATTGGTGTCTCTTGAGATGGGAAAAATTCTTCCCGAAGGAATCGGGGAGGTTCAGGAAATTATCGACATGTGTGATTATGCTGTTGGGCTAAGCAGGCAATTGAATGGACAAATTATACCATCAGAACGTCCAGACCACATGATGCTTGAGACATGGAACCCACTGGGAATAGTTGGCGTGATAACTGCTTTCAACTTTCCATGTGCTGTTCTAGGGTGGAATGCTTGCATTGCATTAGTCTGTGGTAACTGTGTTGTCTGGAAGGGCGCTCCAACAACTCCATTGATAACTATTGCTGTGACAAAGCTAGTAGCTGAAGTTCTTGAGAAGAACAACTTGCCTGGTGCAATATTCACCTCTTTCTGTGGAGGTGCGGAAATTGGTCAGGCAATAGCAAAAGACACGCGCATTCCCCTGGTCTCATTTACTGGAAGTACAAAGGTCGGCTTGATGGTCCAGAAAATAGTTAATGAAAGATTTGGCAAATGCCTGCTTGAGCTAAGTGGTAACAATGCAATTATAGTCATGGATGATGCAGACATCAAACTTGCTGTGCGCTCTATTCTGTTTGCTGCTGTAGGAACTGCTGGTCAGCGTTGCACAACATGCCGTAGACTGTTTGTGCATGAGAGTATTTACAAAGATGTACTAGATCAACTTGTTGAAGTCTACAAACAAGTAAAAATTGGGGACCCCCTCGAGAAAGGGACTCTAGTTGGCCCCTTGCATACTCGTTCTTCAGTGGAAAACTTCAAGAATGGTATTTCAGCCATAAAATCACAGGGAGGGAAGATCTTAACAGGTGGGTCCATAGTAGATTCGGAAGGAAATTTTGTACAACCGACAATTGTTGAGATTTCTCCAGATGCTCCTGTAGTTAAAGAGGAATTGTTTGGTCCAGTACTATATGTTATGAAATTTCAGACTCTAGAAGAAGCAATTATCTTGAACAATTCTGTTCCTCAAGGGCTGAGTAGTTCAATCTTCACAAGACGACCTGAAGCTATATTCAAGTGGATTGGGCCACGAGGTAGTGATTGTGGTATAGTGAATGTAAACATACCGACAAATGGAGCTGAGATTGGTGGTGCCTTTGGTGGGGAAAAGGCGACCGGCGGTGGTCGTGAAGCAGGAAGTGACTCTTGGAAGCAATACATGCGCCGTTCTACATGTACCATCAATTATGGAAGTGAACTCCCATTAGCTCAGGGAATAAACTTTGGCTAG 1527 0.4388 MGSEDKGLGFFKEIGLASNNIGSYINGQWKANGSSTTSLNPSNNQAIAQVTEPTLQDYEEGLNACNEAAKIWMTVPAPKRGEIVRQIGEALRAKLEPLGKLVSLEMGKILPEGIGEVQEIIDMCDYAVGLSRQLNGQIIPSERPDHMMLETWNPLGIVGVITAFNFPCAVLGWNACIALVCGNCVVWKGAPTTPLITIAVTKLVAEVLEKNNLPGAIFTSFCGGAEIGQAIAKDTRIPLVSFTGSTKVGLMVQKIVNERFGKCLLELSGNNAIIVMDDADIKLAVRSILFAAVGTAGQRCTTCRRLFVHESIYKDVLDQLVEVYKQVKIGDPLEKGTLVGPLHTRSSVENFKNGISAIKSQGGKILTGGSIVDSEGNFVQPTIVEISPDAPVVKEELFGPVLYVMKFQTLEEAIILNNSVPQGLSSSIFTRRPEAIFKWIGPRGSDCGIVNVNIPTNGAEIGGAFGGEKATGGGREAGSDSWKQYMRRSTCTINYGSELPLAQGINFG* 509
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy13g2357 508 PANTHER ALPHA-AMINOADIPIC SEMIALDEHYDE DEHYDROGENASE 20 505 IPR044638 GO:0004029
Ahy13g2357 508 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 37 485 IPR016162 GO:0016491
Ahy13g2357 508 CDD ALDH_F7_AASADH 24 496 - -
Ahy13g2357 508 Pfam Aldehyde dehydrogenase family 33 488 IPR015590 GO:0016491
Ahy13g2357 508 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 265 272 IPR029510 GO:0016491
Ahy13g2357 508 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 269 460 IPR016163 GO:0016620
Ahy13g2357 508 PANTHER ALPHA-AMINOADIPIC SEMIALDEHYDE DEHYDROGENASE 20 505 - -
Ahy13g2357 508 SUPERFAMILY ALDH-like 20 497 IPR016161 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy13g2357 Ahy-Chr13 51529478 51534838 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy13g2357 1 508 Acyl Lipid Metabolism Gene Families AT1G54100 80.118 0.0 850
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy13g2357 K14085 - gmx:100811186 918.687
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy13g2357 13 51529478 51534838 Ahy13g2357 13 51529478 51534838 ECH
Ahy13g2357 13 51529478 51534838 Ahy3g2062 3 49134047 49139390 hybridization