Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy13g2335 ATGGTAACAATTGCTGCAGCCAACGCCACCAAGAGAATAGAGACCTACGAGGAGTTCGCAAAAGTACACGCCATACTCCTCGCTGCTTCGGGCTTGCCGGAGTCCCTCCACCGCCGCCTCTTCCAGAAGCTCTCCGCCGAGTGCTTCGACGGCGGTAACTACTTCCAGATCGAGCCATGCGAGGAAGGCCGCCAGAGGCTCCTCGTCCTCACCGCGGAGTCCATGGCAAAGCACTCCGACGTCTTCCTCGTCGACCATGCTTGGACCTTCAGACTCACCGATGCTTACAAGCAGCTGCATGAGGTTCCGGGATTGGCGGAGAGGATGGGGGCGTTGATGTGTGTGGATATTAATTTGAATGCAGAGGGAGAAGATGATGGAGCTTTGAGTGATACACGTGGCAGTGTTACGGAGGTTCTGGAGAGTGAGGTTCGAGAAGCAAAAGAGAAAAGTGATGGTAAGTTGAGGTGGTTGGAGCTTGAGGGGCTTGACATAAATGATGAGGTGCTCTTGTCTCTCGAATTACCAACTAGATTTCCGGATTTAGTGGCCCTTAGCCTGCTTGGAAACAAGCTCAATAGAGTGGAAACAATTGTTCAGGAAGTTAGCAAATTTAAACAACTTAAAGGACTCTGGCTGAACAATAACCCGGTTCTAGAAAAAGGTGATAGTGAACTTGCGGATGCACTTCTTAAGGAGTTGCCAGAACTGGAAATTTATAATTCAACTTTCACAAGCAATTTTGGGGAATGGGCATTGGGGTTCTGTGCAGGGATATATGAAAAGGATAACCCAGGAAATGTTGATCAGGCTAGTACTCCATTGCAGAGTGTGTCAACTCTTGATCTTTCAAATAGAAATATTCACAATTTAATCAACAAGGCATTTACACCCAATTGTTTGCCATCTCTTTCATGCCTGAATATTCGTGGAAATCCATTGGAGCTAAACTCAATTGGTGGCTTATTAGATCTACTAAGGACATTCCCTTCATTGTGTTCTTTGGAGGTGGATATTCCTGGTCCACTTGGAGGAAGTGCCATTGAAATCCTGGAATCACTTCCTAACATTTCCCAGCTAAATGGCATCAGTGCATCAAAAATATGGGAAACTGGAAAGCATGTTATAGATTCAGTGCTTCTTCCTCGTCTTCCGGAGTGGACTGCTGATGACCCTCTTGCTGATCGTATTGTAAATGCAATGTGGCAATATCTAATGACATATAGACTTGCTAATGAAGAAAAATTAGATGAGACTTCTGTTTGGTATGTGATGGATGAACTGGGTTCGGCTTTGCGGCATAGTGATGAACCAAATTTCAGAGTGGCACCTTTTCTTTTCATGCCTGATGGTACTTTGGCATCAGCTGTGAGCTTTTCTATTCTGTGGCCAACACAGAACGTTATAAAAGGTGATGAATGCACTCGTGATTTTCTACTTGGTATTGGGGAGGATAGACAACGTTCTGCCAGACTTACTGCCTGGTTCCACACACCAGAGAACTATTTTGTCCAAGAGTATGAGAAGCACAATCAGAAATTGCAATCCAGAAAGTTAACATTACCCAAGGTGCAGTCTTCTGAGACTAGAAGCATTCGTCATCATGATGGGCGTGCTTTACGTGTCTACACAGATATACCGCATGTGGAGGAAAACTTGACACATCCTGATTTTGTAATCACAAAGGAACCAAAAGATGCGGATATAATATGGACAAGTGAGCAGGTAGATGAAGAGATGAAGAAAGCTACAGGAATAACAGATCATCAATACATCAACCAATTTCCATTTGAGGCATGTCTTGTAATGAAACATCATTTGGCAGAGACAATTCAGAAGGCACATGGATCTCCTCAATGGCTGCAGCCTACTTATAACCTTGAAACACATCTGTCTCAACTTATTGGTGACTATCACGTACGCAAAAGAAAAGGACTAGACAACCTTTGGATCTTAAAACCTTGGAACATGGCCCGAACTATTGATACAACTGTAACTGATAATTTACCTTCGATTATCCGGCTCATGGAAACAGGTCCAAAGATTTGCCAGAAGTATATTGAAGAACCTGCTTTGTTCCAGGGGAAAAAGTTTGATCTCCGTTACATTGTATTGGTCCGGAGTATGAATCCTTTGGAGATATTCCTGTCAGATTGTTTCTGGGTTAGGATAGCGAATAATAAATATTCTCTGGACAGAAGTAGTTTTTTTGAGTATGAAACTCACTTCACCGTTATGAATTATCGTGGAAGAATAAATTTCAAGAATACTAAGGATTTTGTGAGGGAATTTGAGGAAGAGCATCAAGTTAAATGGTCAGATATACATACTCGAGTAAGAAACATGATTCTATCCGTATTCGAGTCAGCTGCTGTTCTACATCCAGAGATGCATAGTACAAAATCAAGGGCCATTTATGGTGTAGATGTCATGTTGGACAGATATTTCCAACCAAAGATACTTGAGGTGACATACTGTCCGGACTGTACTCGAGCATGCAAATTCGACATGGAGATTGTGGTAGGAGACGGAGGTGTTGCCAAGGGGTGTGATTTTTTCAACAATGTGTTTAGTTGTCTCTTTTTGAATGAGATTTCACAGGTTAGCCAGTTGTATTGCAAGCATAATTAG 2631 0.4291 MVTIAAANATKRIETYEEFAKVHAILLAASGLPESLHRRLFQKLSAECFDGGNYFQIEPCEEGRQRLLVLTAESMAKHSDVFLVDHAWTFRLTDAYKQLHEVPGLAERMGALMCVDINLNAEGEDDGALSDTRGSVTEVLESEVREAKEKSDGKLRWLELEGLDINDEVLLSLELPTRFPDLVALSLLGNKLNRVETIVQEVSKFKQLKGLWLNNNPVLEKGDSELADALLKELPELEIYNSTFTSNFGEWALGFCAGIYEKDNPGNVDQASTPLQSVSTLDLSNRNIHNLINKAFTPNCLPSLSCLNIRGNPLELNSIGGLLDLLRTFPSLCSLEVDIPGPLGGSAIEILESLPNISQLNGISASKIWETGKHVIDSVLLPRLPEWTADDPLADRIVNAMWQYLMTYRLANEEKLDETSVWYVMDELGSALRHSDEPNFRVAPFLFMPDGTLASAVSFSILWPTQNVIKGDECTRDFLLGIGEDRQRSARLTAWFHTPENYFVQEYEKHNQKLQSRKLTLPKVQSSETRSIRHHDGRALRVYTDIPHVEENLTHPDFVITKEPKDADIIWTSEQVDEEMKKATGITDHQYINQFPFEACLVMKHHLAETIQKAHGSPQWLQPTYNLETHLSQLIGDYHVRKRKGLDNLWILKPWNMARTIDTTVTDNLPSIIRLMETGPKICQKYIEEPALFQGKKFDLRYIVLVRSMNPLEIFLSDCFWVRIANNKYSLDRSSFFEYETHFTVMNYRGRINFKNTKDFVREFEEEHQVKWSDIHTRVRNMILSVFESAAVLHPEMHSTKSRAIYGVDVMLDRYFQPKILEVTYCPDCTRACKFDMEIVVGDGGVAKGCDFFNNVFSCLFLNEISQVSQLYCKHN* 877
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy13g2335 876 ProSiteProfiles TTL domain profile. 535 863 IPR004344 GO:0036211
Ahy13g2335 876 Gene3D Ribonuclease Inhibitor 258 367 IPR032675 -
Ahy13g2335 876 Gene3D - 664 843 - -
Ahy13g2335 876 PANTHER TUBULIN--TYROSINE LIGASE-LIKE PROTEIN 12 10 870 IPR027749 -
Ahy13g2335 876 SUPERFAMILY RNI-like 154 361 - -
Ahy13g2335 876 Pfam Tubulin-tyrosine ligase family 589 839 IPR004344 GO:0036211
Ahy13g2335 876 Gene3D Ribonuclease Inhibitor 124 247 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy13g2335 Ahy-Chr13 50147868 50155038 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy13g2335 K16609 - gmx:100809212 1446.03
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy13g2335 13 50147868 50155038 Ahy13g2335 13 50147868 50155038 ECH
Ahy13g2335 13 50147868 50155038 Ahy3g2045 3 47312632 47319678 hybridization