Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy13g2287 ATGCCTTACAATCACTACCACCGTCGCCCGTGGAACTCCTCACCGCCCTTCATGAGCCCTCCACTTCTAATCATTCTTGTGCCTATAATCGCCATAGCGCTGCTCTTCCTAGTCGTGCCGCCACTCCTCTCCGCCACCACCAACGTTCTCCGGCCATCTTCCGTCGTCAAAAAGAGCTGGGACTCACTCAACATCCTCCTCGTTGTGTTTGCTATCCTCTGCGGCGTTTTCGCCAGGCGAAATGACGACGAATCGCCACCTCCATACGACCCCGTCGTTTCGGATCAAAACGCTGCGTTTCGTAAAATGCCTTCTTCGGGAGAAAGAGAAAGAGAGGGAGAGGGAGAGGGAGAGGGAGAGAGAGAAGGAAGTGGTTATGTTTCGCAGCAGTGGTTTGGGTTTGCAGGGGAGAGGAAGGGTTATGAGACCCCTCCGATCCAGGTTCAGTCACCGGCAACCGGCGTTACCCGGTTGAGAAGGAACAGCAGCTCATATCCAGATCTAAGGAGCTGGGAAACCAGCGATGACCGGTTCAGGTTTCGATTCTATGACGACTTTGAAATCGACAAGCAGTTTCGCTCCCCCGCCAGGCATCAGTTTGCCACCGTGGACCGACGCACGCGGTGGCCGGGACCAGACGATGGAGAAGTTCACGAACTTCATATTAAAGAAATTCCAGTTGATACCTTCCAGACTAGCTCATCTCCTCCATCTCCGGAACCGCCCCCGAGATCATCGGCGCCCCCGACGCCTCCTCCTCCCCCGCCGCCGCCACCACCTCCTCCTCCGCCGGCGGATACTCGTCGGAAGCCAAGACGAACACGAACATATGAGAAAGAAAACAGTGTTACTGAGATAACCGAGCTCGACAATGATCGCAAGTTCACGAGTGTACGGTCTCCGCCGCTATCTCCTTCGACGCCGCCCCCTCCTCCACCTCCGGCTCCGGTGAAGACGCGATCGGATCACAAGCGCGGTAAGAGCGAACAAAGGAAGAGCACCGTGAAGAGAGACATAGCAACGGTTTGGGCTTCGGTACTCTCCAACCAGAGAAAGAGGAAGACAAAGCAGAAAACCAAGAACGAACACAATCAAAATTTCAATCACAATTACGATAACGTTATTGACGAGTTAACAAATAGTTATATGAGACCACCACTGTCGCCTGCACCTGCGCCTCCGCCACCCCCACCCCCGCCTCCGCCGCCATCTTCGGTTTTCCAGAGTTTATTCCGAAAAGGACTCGGCAAGAGCAAGAAAATCCATTCAGTATCTGCGCCACCGCCGCCACCACCTCCTCCTCCGTTGACATCTTCACGGAGATGGTCAAAATGGAAGAAACCGATCCCTCCTCCGCCACCTCCGCCTAGTGCGGCAGATCCACCGGAAGAATCTCTTCGGCGCAGAAACGCTGGGAGGCCGCCATTGCCGAACAGAGCCAGCACCTATAACGACGAGGCAGTATACGCCGGGAACCAGTCGCCGCTGATTCCGGTTCCGCCCCCGCTTCCTCCGTTCAAAATGCCGGCAATGAAGTTCCTGGTCCGTGGCGATTTTGTTAAAATACGTAGCAACCAGAGCTCGAGATCCAGCTCAAGGTGTAGCTCGCCGGAACGGTACGGAGTCGAAGAATCAGAAACGATTGAAACAACTGATTCCGTTATTAACCCCGTTACAGATCGTAACGGCGAGGTGAGTGGGTCCGTTTTCTGTCCCAGCCCCGACGTTAACGTAAAGGCTTCAACGTTCATTGCTAGGCTAAGAGGAGAATGGAAGCTTGAGAAGCTCAATTCCTTGAAGGAGAAAGGCAATGGCTCATTGCCTTTTAGAGGTTAA 1836 0.543 MPYNHYHRRPWNSSPPFMSPPLLIILVPIIAIALLFLVVPPLLSATTNVLRPSSVVKKSWDSLNILLVVFAILCGVFARRNDDESPPPYDPVVSDQNAAFRKMPSSGEREREGEGEGEGEREGSGYVSQQWFGFAGERKGYETPPIQVQSPATGVTRLRRNSSSYPDLRSWETSDDRFRFRFYDDFEIDKQFRSPARHQFATVDRRTRWPGPDDGEVHELHIKEIPVDTFQTSSSPPSPEPPPRSSAPPTPPPPPPPPPPPPPPADTRRKPRRTRTYEKENSVTEITELDNDRKFTSVRSPPLSPSTPPPPPPPAPVKTRSDHKRGKSEQRKSTVKRDIATVWASVLSNQRKRKTKQKTKNEHNQNFNHNYDNVIDELTNSYMRPPLSPAPAPPPPPPPPPPPSSVFQSLFRKGLGKSKKIHSVSAPPPPPPPPPLTSSRRWSKWKKPIPPPPPPPSAADPPEESLRRRNAGRPPLPNRASTYNDEAVYAGNQSPLIPVPPPLPPFKMPAMKFLVRGDFVKIRSNQSSRSSSRCSSPERYGVEESETIETTDSVINPVTDRNGEVSGSVFCPSPDVNVKASTFIARLRGEWKLEKLNSLKEKGNGSLPFRG* 612
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy13g2287 611 MobiDBLite consensus disorder prediction 266 295 - -
Ahy13g2287 611 PANTHER COTTON FIBER (DUF761) 7 602 - -
Ahy13g2287 611 MobiDBLite consensus disorder prediction 142 167 - -
Ahy13g2287 611 PANTHER HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY PROTEIN 7 602 - -
Ahy13g2287 611 MobiDBLite consensus disorder prediction 224 487 - -
Ahy13g2287 611 MobiDBLite consensus disorder prediction 104 121 - -
Ahy13g2287 611 MobiDBLite consensus disorder prediction 446 461 - -
Ahy13g2287 611 MobiDBLite consensus disorder prediction 318 336 - -
Ahy13g2287 611 MobiDBLite consensus disorder prediction 146 167 - -
Ahy13g2287 611 MobiDBLite consensus disorder prediction 83 124 - -
Ahy13g2287 611 MobiDBLite consensus disorder prediction 524 550 - -
Ahy13g2287 611 MobiDBLite consensus disorder prediction 524 538 - -
Ahy13g2287 611 MobiDBLite consensus disorder prediction 302 317 - -
Ahy13g2287 611 MobiDBLite consensus disorder prediction 424 438 - -
Ahy13g2287 611 MobiDBLite consensus disorder prediction 235 265 - -
Ahy13g2287 611 MobiDBLite consensus disorder prediction 386 406 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy13g2287 Ahy-Chr13 47196794 47199394 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy13g2287 - - ahf:112738300 953.74
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy13g2287 13 47196794 47199394 Ahy13g2287 13 47196794 47199394 ECH
Ahy13g2287 13 47196794 47199394 Ahy3g2009 3 44451758 44453990 hybridization