Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy13g2189 ATGGCAGACAAACCCCAACCGGTTCGGGTAGTGTACTGCCCCGTGTGCTCTATGCCACCCGAATACTGCGAATTCGGACCCGATTTCGAAAAATGCAAACCCTGGTTGATCCAAAACTTCCCTGACCTATATCCCGATCTTCTCAAAGAAACGAATGAAAGGGATGCTGATAAAGTTGCTGATAAGCTTCAAGGTACCGGTATATCTTCGGGGTCTAGTGATGGAGCTGCTACCTCAGCACCAAAGCAAGAAGAGGTCAAGCGTCTTCCTGGTGGGAAGATAAAGAAAAAGGAGAAGCAAGAGGTTGTTATTGAGAAAGTCATTCGTAACAAACGAAAATGTATCACGACTGTGAAAGGACTAGAACTTTTTGGTGTCAAGCTTAGTGATGCTTCAAAGAAACTTGGTAAAAAGTTTGCTACAGGAGCTTCTGTTGTAAAGGGTCCAACTGAGAAAGACCAAATTGATGTTCAAGGGGATATATCTTATGACATTGTGGAGTTCATTACAGATACATGGCCTGATGTCCCAGAAAGTGCAATTTACTTCATAGAGGATGGAAAGAAGGTTCCAGCTGCTTGA 582 0.4364 MADKPQPVRVVYCPVCSMPPEYCEFGPDFEKCKPWLIQNFPDLYPDLLKETNERDADKVADKLQGTGISSGSSDGAATSAPKQEEVKRLPGGKIKKKEKQEVVIEKVIRNKRKCITTVKGLELFGVKLSDASKKLGKKFATGASVVKGPTEKDQIDVQGDISYDIVEFITDTWPDVPESAIYFIEDGKKVPAA* 194
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy13g2189 193 TIGRFAM DRP1: density-regulated protein DRP1 7 183 IPR005873 GO:0003743
Ahy13g2189 193 CDD DENR_C 100 185 IPR046447 -
Ahy13g2189 193 SUPERFAMILY eIF1-like 19 184 IPR036877 GO:0003743|GO:0006413
Ahy13g2189 193 PANTHER TRANSLATION MACHINERY-ASSOCIATED PROTEIN 22 1 193 - -
Ahy13g2189 193 MobiDBLite consensus disorder prediction 65 79 - -
Ahy13g2189 193 PANTHER DENSITY-REGULATED PROTEIN HOMOLOG 1 193 - -
Ahy13g2189 193 Pfam Translation initiation factor SUI1 99 172 IPR001950 GO:0003743|GO:0006413
Ahy13g2189 193 ProSiteProfiles Translation initiation factor SUI1 family profile. 102 173 IPR001950 GO:0003743|GO:0006413
Ahy13g2189 193 MobiDBLite consensus disorder prediction 55 97 - -
Ahy13g2189 193 Gene3D - 53 179 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy13g2189 Ahy-Chr13 42935953 42939415 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy13g2189 K24272 - gmx:100306708 337.421
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy13g2189 13 42935953 42939415 Ahy13g2189 13 42935953 42939415 ECH
Ahy13g2189 13 42935953 42939415 Ahy3g1879 3 41055122 41058612 hybridization