Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy13g1934 ATGGGTCGCCCACCCAGTAATGGAGTCCCCGCCTTCCGCTTCACTCCCACCGAGGTGACAGAAATGGAAACTATTCTGCAAAATCACAACTATGCAATGCCAGCACGCGATGTACTTACAGCTCTTGCAGAGAAGTTCAGTGAATCACTAGAACGGAAAGGCAAGATTACAGTGCAGATGAAACAGGTCTGGAATTGGTTTCAAAATAAGCGCTATGCTATTAGGGCAAAATCAAGCAAGACACCTGGAAAGTTAAATATCACTCCTATGCCTCGGGATGAATCAACCACAGTAAGGAATATACCTCAACTGACAGCTGGTCCAATTCCTACTACATCAGGTTCAGTTCCAACACCAGGAAAGGTAACTCCAGAAAATTCAGTTATGGAATTTGAAGCTAAATCTGGAAGAGATGGAGCATGGTATGATGTGGCTAGCTTTCTATCACACAGATATCTGGATACAAGTGATCCGGAAGTGCTGGTACGGTTTTCTGGTTTTGGATCCGAGGAAGATGAGTGGATTAATATCCAAAGAAATGTCAGGCCACGTTCCTTGCCATGTGAATCATCAGAATGTGTTGCAGTCCTCCCGGGGGATCTCATTCTTTGTTTTCAGGAAGGTAAAGAGCAAGCCCTTTACTTTGATGCCCATGTGCTTGATGCTCAAAGACGGAGGCATGATGTAAGAGGCTGTCGATGTAGATTTTTGGTTCGATATGATCATGATCAGTCAGAGGAAATTGTCCCGCTCAGAAAGGTCTGTCGCAGACCTGAAACCGATTACAGATTACAGCAACTTCATGCTGCAAATGAAGCCGGAGGAGCTACAGATCAGCAAAAGATTGCCACAAAACCAGTAAATGCGCATGGTATCAGGGTTACTAGTTCTTCTGAAACGGTGCCACGGCAGCAGAATGCAAACATCTCTATGGCACCACCACATGTTTTGCAAATGACAGTTTCGGTAGCGCCCCAAAATCTAGTTGTTGATCCAAAGAAAACTGAAACGATTATTAATGTTCAGGCAGGAAATTCGATTATTGCCCCAGGTAGTGTTGCGCTTACTAGCAGCATTGCTATAAGCAGTGTTCCTGAGGACTGTTTGTACCTTGGCTTTTATCTGATCTCTGGAAATTAA 1140 0.4439 MGRPPSNGVPAFRFTPTEVTEMETILQNHNYAMPARDVLTALAEKFSESLERKGKITVQMKQVWNWFQNKRYAIRAKSSKTPGKLNITPMPRDESTTVRNIPQLTAGPIPTTSGSVPTPGKVTPENSVMEFEAKSGRDGAWYDVASFLSHRYLDTSDPEVLVRFSGFGSEEDEWINIQRNVRPRSLPCESSECVAVLPGDLILCFQEGKEQALYFDAHVLDAQRRRHDVRGCRCRFLVRYDHDQSEEIVPLRKVCRRPETDYRLQQLHAANEAGGATDQQKIATKPVNAHGIRVTSSSETVPRQQNANISMAPPHVLQMTVSVAPQNLVVDPKKTETIINVQAGNSIIAPGSVALTSSIAISSVPEDCLYLGFYLISGN* 380
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy13g1934 379 MobiDBLite consensus disorder prediction 103 122 - -
Ahy13g1934 379 CDD homeodomain 13 75 IPR001356 GO:0003677
Ahy13g1934 379 Gene3D - 126 187 - -
Ahy13g1934 379 MobiDBLite consensus disorder prediction 103 123 - -
Ahy13g1934 379 Gene3D - 9 83 - -
Ahy13g1934 379 Pfam SAWADEE domain 129 255 IPR032001 GO:0003682
Ahy13g1934 379 SMART HOX_1 7 81 IPR001356 GO:0003677
Ahy13g1934 379 Gene3D - 188 260 - -
Ahy13g1934 379 PANTHER PROTEIN SAWADEE HOMEODOMAIN HOMOLOG 2 1 328 IPR039276 -
Ahy13g1934 379 PANTHER PROTEIN SAWADEE HOMEODOMAIN HOMOLOG 2 1 328 - -
Ahy13g1934 379 SUPERFAMILY Homeodomain-like 12 78 IPR009057 -
Ahy13g1934 379 ProSiteProfiles 'Homeobox' domain profile. 13 77 IPR001356 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy13g1934 Ahy-Chr13 33348232 33361024 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy13g1934 - - aip:107630217 761.911
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy13g1934 13 33348232 33361024 Ahy13g1934 13 33348232 33361024 ECH