Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy13g1894 ATGGCCACAGCGCTCGAATTCCTCGCTGTCCTTCCTCGCCCCTCCTCCTCCGCCACCGCCTTCTCTCCGGCCACCGCCCGCCGTGCCTCCGCTATGTTTCCCCACTATTCCGGGATCAAGCCCAGACCCATCGCCGCCGTTCGCTGCGCCGGTCCACTGAAGCCCAGAACCCTTACTCGCAGCGGGCGGGTTGTGTGCGAGGCTCAGGATACCGCCGTTGAAGTGGCTTCTATTACCGATGCTAATTGGCAATCGCTTGTCCTTGAATCTGAATCTCCTGTGTTGGTTGAATTCTGGGCACCATGGTGTGGTCCTTGCCGAATGATCCACCCTATAATTGATGAGCTGGCGAAAGAATTCGCTGGGAAGTTAAAGTGCTACAAACTGAACACTGACGAGAGCCCTTCAACCGCCACTCGGTATGGGATTCGGAGTATCCCCACGGTGATGATCTTCAAGAATGGCGAGAAGAAAGACACAGTTATTGGTGCTGTGCCCAAGTCAACATTAACCACGAGCATAGAAAAATTCTTATGA 537 0.5456 MATALEFLAVLPRPSSSATAFSPATARRASAMFPHYSGIKPRPIAAVRCAGPLKPRTLTRSGRVVCEAQDTAVEVASITDANWQSLVLESESPVLVEFWAPWCGPCRMIHPIIDELAKEFAGKLKCYKLNTDESPSTATRYGIRSIPTVMIFKNGEKKDTVIGAVPKSTLTTSIEKFL* 179
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy13g1894 178 CDD TRX_family 81 175 - -
Ahy13g1894 178 Gene3D Glutaredoxin 74 178 - -
Ahy13g1894 178 PANTHER THIOREDOXIN M-TYPE PROTEIN 4 178 - -
Ahy13g1894 178 ProSitePatterns Thioredoxin family active site. 95 113 IPR017937 -
Ahy13g1894 178 SUPERFAMILY Thioredoxin-like 73 178 IPR036249 -
Ahy13g1894 178 TIGRFAM thioredoxin: thioredoxin 79 177 IPR005746 GO:0015035
Ahy13g1894 178 Pfam Thioredoxin 75 175 IPR013766 -
Ahy13g1894 178 PRINTS Thioredoxin family signature 102 111 - -
Ahy13g1894 178 PRINTS Thioredoxin family signature 94 102 - -
Ahy13g1894 178 PRINTS Thioredoxin family signature 142 153 - -
Ahy13g1894 178 ProSiteProfiles Thioredoxin domain profile. 66 178 IPR013766 -
Ahy13g1894 178 PANTHER GEO12009P1 4 178 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy13g1894 Ahy-Chr13 31999093 32013951 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy13g1894 K03671 - gmx:100818054 263.848
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy13g1894 13 31999093 32013951 Ahy13g1894 13 31999093 32013951 ECH