Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy13g1813 ATGTCACTCTCTTTCTCTTCTTCTTCCTTAACCGTTTCCCTCACTCGCGAGCTTTCTTCTTCATCCTTCTCTCCAGCAACCACCACCCGTTCCTTCTTCTACCGCACCAGACCCGCTTGTTCTCCTTCTTCCACTATCACGTGCTTCTCCAATTCCAAGAACCACCTTGCGAGGGCCATCGAGCTCGCAAAGGAACTTGTGGCAGGCCAGCGTGACACGTCAGCATCAGTAGCAGCAGAAGCTAGTTTTGTGAAGCAGTTGAAGTTGAAGAATTTAGTTCCCGCCATAATTGTGTCGGTTCAGATCACTCTTTTGCTTCCTTTAGTTGGACCATGGGATTATTCAGGGTCGTATCTGTCACCTTCTGCAATGGCGATTCTGTATTCACCGGATACCAAGGTTCCCAGAACCGGAGAAGTTGCTTTGAGAAGGGCTATTCCTGCAAACGCTAACATGAAATCCATTCAGGATTCTCTGGAAGATATTTCGTACTTGTTACGGATCCCCCAGAGGAAACCATATGGAACAATGGAGGGGAACGTGAAGAAAGCATTGAAGATAGCAGTAGATCAAAAGGAGTCTATACTTGCAAGTATACCAGCAGAATTGAAGGAAAAGGGTTCTTTGGTACATGCATCTCTAATAGATGGAAAGGGTGGGTTGCAAGCACTTCTACAATCTATAAAGGAACAGGATGCAGATAAAGTATCTGTGAACCTTGCTTCTGCACTAGATACTGTAGCAGAGCTAGAGTTATTACAGGCACCGGGAATATCTTTCTTGTTGCCAGAGCAATATGTGCAATATCCACGGCTTTCAGGGAGAGGAACTGTTGAGTTTACCATTGAGAAAGGAGATGGTTCAACATTTTCTCCAGTTGGTGGTGAATCAAAAAAAACTGCCACCATTCAGGTTGTTATTGATGGATACTCTGCTCCATTAACTGCAGGGAATTTTGCAAAACTGGTGATGGATGGAGCTTATGATGGTGCGAAGCTCAGCACTTCCAACCAAGCTATTCTATCAGATAATGGAGCTGATAAGAACAGTGGTTTCAGTGTTCCCTTGGAAATAATGCCCTCTGGACAATTCGAGCCCCTTTACAAAACAACGCTGAGTGTGCAGGATGGAGAACTTCCAGTTCTTCCTCTATCTGTTTACGGGGCAGTAGCTATGGCGCATAATGAAGTCTCTGATGAGTATTCATCGCCTTATCAGTTTTTCTTCTATCTCTATGATAAACGAAGTGCTGGCTTGGGAGGGATATCATTTGATGAAGGACAATTTTCGGTTTTCGGATACACAACTAATGGGAGAGATATCCTACCCCAGATAAAAACTGGTGATATTATTCGTTCTGCAAAGCTTGTCGAAGGCCAAGACCGCCTTGTATTGTCAAAGGATAGTTAA 1410 0.4433 MSLSFSSSSLTVSLTRELSSSSFSPATTTRSFFYRTRPACSPSSTITCFSNSKNHLARAIELAKELVAGQRDTSASVAAEASFVKQLKLKNLVPAIIVSVQITLLLPLVGPWDYSGSYLSPSAMAILYSPDTKVPRTGEVALRRAIPANANMKSIQDSLEDISYLLRIPQRKPYGTMEGNVKKALKIAVDQKESILASIPAELKEKGSLVHASLIDGKGGLQALLQSIKEQDADKVSVNLASALDTVAELELLQAPGISFLLPEQYVQYPRLSGRGTVEFTIEKGDGSTFSPVGGESKKTATIQVVIDGYSAPLTAGNFAKLVMDGAYDGAKLSTSNQAILSDNGADKNSGFSVPLEIMPSGQFEPLYKTTLSVQDGELPVLPLSVYGAVAMAHNEVSDEYSSPYQFFFYLYDKRSAGLGGISFDEGQFSVFGYTTNGRDILPQIKTGDIIRSAKLVEGQDRLVLSKDS* 470
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy13g1813 469 ProSiteProfiles Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. 290 446 IPR002130 GO:0000413|GO:0003755
Ahy13g1813 469 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 301 450 IPR002130 GO:0000413|GO:0003755
Ahy13g1813 469 Gene3D - 296 461 IPR029000 -
Ahy13g1813 469 SUPERFAMILY Cyclophilin-like 302 453 IPR029000 -
Ahy13g1813 469 Gene3D - 148 253 IPR023222 -
Ahy13g1813 469 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE CYP37, CHLOROPLASTIC 5 467 IPR044259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy13g1813 Ahy-Chr13 29571704 29581205 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy13g1813 - - aip:107630088 879.396
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy13g1813 13 29571704 29581205 Ahy13g1813 13 29571704 29581205 ECH