Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy13g1720 ATGCGCGCCTCCACCATAAGAAAACTATGCACCCTCAGCACCCTATATCGCTCTCACTCAGCATGGAAAGCCATGGCACTTGCCTCTTCCTCTTCCGTTTCCATTTCTGAGCACAATGCTTCTGAGTTCAACCATTCTTCTATGAGCCACAACCGTGTCCCTTCTCGAGGTGCAGAGGATTCTCCTGATGATGATAATACGGCTTCCGAGGTTTCTTCTATAGTGTACAGTCCATCTCTGGCAGAGGAACCTGTTGTCGTGAAAGAGGAACCTGTTGTCGAAGAAGTTGACTATCGCAAAGCAAAAATGGAAAAAGTAGCAGATTTAACGTGGTGTCCTAATCTGTCTCCTGGCTACCTTTTGACTAAACGGAGGGGGTTAGCCCGTGAGAGGAAAAGCAAATGGATTTTTAAACTCAGCCATGATGTCCGTTTTGATAGGTTAGTTAAAATGTGTGCGAAAAGACTAGGAACAGGGACGACCCTTGATGTGTTTCGTCAGCTGGGTCGAGAGACTGGTGTGAAAGAGTTCAATGCATTAATAAAGATGAGTATACAGAAGGCAAGGACTACTGATAATGAATACATTGCCATAGAAGAATTGAGTAAGGCTTTTCACCTTTTAGAAAATATGAAGGAGTGCGGTTTTAAGCTAGAAGAGGAAACATATCAACCACTGCTTAGGTATGTCATAGACATGGGCATGGTTAAAGAGTTTCAACTTTTCTCTGATGTGGTCAGAGCTGAGTGTTCAGTTTCACGGTTAGGTTACTATGAAATGTTGCTGTGGATAAGAGTTGAAGATGAAGAAATGATTCGGGATATTTGTGAATATATTACCGTAGAAGATGGCCAAGACACTGCTGCTATGCGAGAAAATTACTTATTGGCTCTTTGTGAAAGTGATCTGAAGTTCCAGATTACAGATGTGTTGAAAAATATAGACATAACAATGTTTTCATCTGCAAAATCTATAGCAAGTGTATTTCAATCATTAGGAAGGCTACAGTTGGAATCTCTTGCCGAGAATTTATTTTTGGATTTGAGAGCACAAGATTTTGATGAAGATGATATTTCAGGCTTCATTGCTGATTTTGCTGTTAGCACTCCAAATTTAGCGGTTGAAGATATCATCTCAAAATTCAAGAGTTTGCATGATCTATTGGAAGTTTTACATTCATCGTCATCATATGAAAAGCTGATTATGTATTGCTGTGATATAGGCAAGGTTGATGTTGCACTTGATCTTGTTGATAATATGTGTGAAGCAGGCTTTACATTGTCAACTAGGATGTTACAGTCCATATTACACATTTGTGAGGAAACCTATGAACATATTTTGGTAGGACAGATTAATTGCAACAGCTCTGCCTTTTTTCTCCCTTCGCAATTCGTCCATACTGTTTCAATTGCTGTAGTTTACCGGATCTATTCTATCATACAGCGGTTCCATTTGAAGTTGAATGGTGAAATATGTAGGTGTTTGGTAAATTTTTGCGTGAGGGTGAAAGATTTTAAAGGTGCATACAAGATGGTTGATGACTTGGAGAAAATGAATTTCAAACCTACTACCGCCATGTACAATGCTATAATGGCAGGATATTTTCGAGAGAAAAATATCAGTGGTGCTTTGAGGGTCCTCAAGCACATGCAGGATGCCAATGTTAATCCTGATGTACAGACTTTCAGCTATTTGATTAGTAATTGTGAAACAGAAGAGGATATAATCAAGTATCGTGAAGAAATGGAGCAATATAAAATCCCACTTGCAAAACCGATTTTTATGGCCCTTATTAATTCATATGCAGCTTGTGGCAAATTGGATATGGCAAAACAGGTCATTTTGGATCCGAACATACCAGCAAAAAGCTTAAATGAAATCAAGAGCGTCCTTGTCTCAGCTCTTGCATCACATGGGCAGTTGTCCGAGGCACTTTTAGTATATGAGGAGATTAATAAAGCTGGATACAATTTGGAACCAAAAGCTGTTATAAGTCTTATCGAAGAGTTCACCAAATTCAAAGGAGAGTTGGATGGGATGCTTATGCTACTTACAGAATTGAGTGATCTAGACTATTGGGTCGATGGCTGCTTCAGAGTTATCATATATTGTGTTCACAACAAGCATCTAAGTTCTGCTATTGACTTGTTCAAGAAACTCAAGGATAAGTTTGAAAGTGATGAACTAGTATTGGAAGTTCTCTTTGATGAAGTGTTTGCTGCAATTGCAACATCCGAGTCCTCAAATTTGCAGATTGGTTTAGACTTGCTTTGGGCAGTCAAGAACGAGCTTGGTCTCGTGCCTTCACGGCAATGTCTTGATTTTCTTCTAAGTGCCTGCACCAATGCTGGAGATTTGAGTAATGCTCGTTTGATTTGGAGAGAATATGAGGTTGCTGGATTTCCATACAATGTGCTAAGTTATTTGAGGATGTATCAAGCACTTTTGGCATCGGGAGATTATAGATCTGCTAACTTTATGCTAAGTAAAATTCCGAAAGATGACAGCGAGGTATCTGCTATCATCAAAGCCTGTCAAGAAACATACTCTGGTCTTTCCTCTGTGGCAAAGAAGAAAACGAAAGTAACAAAAAAGAAAGAAAAACGAGAGGCTTGA 2616 0.3941 MRASTIRKLCTLSTLYRSHSAWKAMALASSSSVSISEHNASEFNHSSMSHNRVPSRGAEDSPDDDNTASEVSSIVYSPSLAEEPVVVKEEPVVEEVDYRKAKMEKVADLTWCPNLSPGYLLTKRRGLARERKSKWIFKLSHDVRFDRLVKMCAKRLGTGTTLDVFRQLGRETGVKEFNALIKMSIQKARTTDNEYIAIEELSKAFHLLENMKECGFKLEEETYQPLLRYVIDMGMVKEFQLFSDVVRAECSVSRLGYYEMLLWIRVEDEEMIRDICEYITVEDGQDTAAMRENYLLALCESDLKFQITDVLKNIDITMFSSAKSIASVFQSLGRLQLESLAENLFLDLRAQDFDEDDISGFIADFAVSTPNLAVEDIISKFKSLHDLLEVLHSSSSYEKLIMYCCDIGKVDVALDLVDNMCEAGFTLSTRMLQSILHICEETYEHILVGQINCNSSAFFLPSQFVHTVSIAVVYRIYSIIQRFHLKLNGEICRCLVNFCVRVKDFKGAYKMVDDLEKMNFKPTTAMYNAIMAGYFREKNISGALRVLKHMQDANVNPDVQTFSYLISNCETEEDIIKYREEMEQYKIPLAKPIFMALINSYAACGKLDMAKQVILDPNIPAKSLNEIKSVLVSALASHGQLSEALLVYEEINKAGYNLEPKAVISLIEEFTKFKGELDGMLMLLTELSDLDYWVDGCFRVIIYCVHNKHLSSAIDLFKKLKDKFESDELVLEVLFDEVFAAIATSESSNLQIGLDLLWAVKNELGLVPSRQCLDFLLSACTNAGDLSNARLIWREYEVAGFPYNVLSYLRMYQALLASGDYRSANFMLSKIPKDDSEVSAIIKACQETYSGLSSVAKKKTKVTKKKEKREA* 872
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy13g1720 871 PANTHER OS02G0132600 PROTEIN 25 865 - -
Ahy13g1720 871 Coils Coil 861 871 - -
Ahy13g1720 871 Gene3D Tetratricopeptide repeat domain 141 312 IPR011990 GO:0005515
Ahy13g1720 871 Gene3D Tetratricopeptide repeat domain 395 696 IPR011990 GO:0005515
Ahy13g1720 871 Gene3D Tetratricopeptide repeat domain 698 871 IPR011990 GO:0005515
Ahy13g1720 871 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 523 557 IPR002885 -
Ahy13g1720 871 PANTHER OS02G0132600 PROTEIN 25 865 - -
Ahy13g1720 871 Pfam PPR repeat 594 614 IPR002885 -
Ahy13g1720 871 Pfam PPR repeat 630 655 IPR002885 -
Ahy13g1720 871 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 393 427 IPR002885 -
Ahy13g1720 871 MobiDBLite consensus disorder prediction 41 69 - -
Ahy13g1720 871 TIGRFAM PPR: pentatricopeptide repeat domain 526 559 IPR002885 -
Ahy13g1720 871 TIGRFAM PPR: pentatricopeptide repeat domain 396 428 IPR002885 -
Ahy13g1720 871 Pfam Pentacotripeptide-repeat region of PRORP 395 567 IPR033443 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy13g1720 Ahy-Chr13 27167689 27181969 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy13g1720 473 824 Glycosyltransferase AT1G05670 20.433 1.17e-08 57.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy13g1720 - - ahf:112737814 1663.66
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy13g1720 13 27167689 27181969 Ahy13g1720 13 27167689 27181969 ECH
Ahy8g1797 8 36167020 36175542 Ahy13g1720 13 27167689 27181969 PCT
Ahy13g1720 13 27167689 27181969 Ahy8g1797 8 36167020 36175542 PCT