Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy13g1560 ATGGTGGCTGGGAATGGTTTATTTTATCCCATTTTCGGCTTTGCATCGTTGGTTCTATTCATTTACATGTCTTTTGGGGACATGAGGTTGGGTTTTGAGGAAGGGCCAGAAGTGTCTTTTGTGGGTAGAAACGGTACACAGTTTGTGTTGGATGGAAAACCTTTCTACATCAATGGTTGGAACTCTTACTGGTTAATGGTGCAATCTGTGGATGATTATTCAAGGCCAAGGGTGCGTGAGATGCTGAGAGCTGGGGCCAAGATGGGACTCACTGTCTGCAGAACTTGGGCTTTCAATGATGGTGACTACAATGCCCTTCAAACTTCACCTGGTGTCTTCAATGAGCAAGCTTTCAGGGCTTTGGATTACGTTATAGCAGAAGCAAGGCGCCATGGAGTTAGGCTGCTCCTAAGCTTAGTGAATAACTTGCACGCATATGGTGGGAAGACTCAGTATGTTGAATGGGCATGGCAAGAAGGGGTCGGACTAAGCTCATCTAATGATTCTTTTTTCTATGATCCATCAATTCGTAGTTATTTCAAGAATTATGTAAAGACTATTCTGACAAGGAAAAATACTATTACTGGAATCGAATATAGAAATGACCCCATCATTTTTGGTTGGGAGTTAATTAACGAACCTAGGTGCATGACGGATCCTTCTGGAGACACTCTCCAAGATTGGATAGAAGAAATGTCAGCTTTTGTCAAAGTGATCGACAAGAACCATCTTGTGACTGTTGGTCTTGAAGGCTTTTATGGTCCTAATGACCCAAAGCGTTTGACGGTCAACCCTGAGGCTTGGGCATCCAGACTTGGATCTGATTTTATTAGGAATTCCAAAACTGTGAATGTCGATTTCACCTCTGTTCATATATACCCTGACCACTGGTTTCGCGAGGAAGTATATGAAGACTATATGAAATTCGTCTCTAAGTGGATGCTTTCGCACATCGAAGACGGAGACAAGATTTTGAATAAGCCGGTCTTGTTCTCTGAATATGGATTATCAGACACAATCAAGAACTTCTCGCTCTCTAACCGAGAAAACATGTACAGAGTGATTTTAAACATTATCTACAAATCTGCTAAGAAAAGAAGGTCAGGAGCCGGCGCGCTAGTCTGGCAATTCTTAGCCGGAGGAATGACCGAGTTCCTTGACGATTTTGGGATGGTCCCATGGGAGAGGTCGTCGACATATTCGCTTTTTGTCGAACAAGCCTGCAGATTGGCCAAACTCAATGGATGGACTCAAAGGGACATGAGCTTCAAAGAATTTTGTTAA 1284 0.4299 MVAGNGLFYPIFGFASLVLFIYMSFGDMRLGFEEGPEVSFVGRNGTQFVLDGKPFYINGWNSYWLMVQSVDDYSRPRVREMLRAGAKMGLTVCRTWAFNDGDYNALQTSPGVFNEQAFRALDYVIAEARRHGVRLLLSLVNNLHAYGGKTQYVEWAWQEGVGLSSSNDSFFYDPSIRSYFKNYVKTILTRKNTITGIEYRNDPIIFGWELINEPRCMTDPSGDTLQDWIEEMSAFVKVIDKNHLVTVGLEGFYGPNDPKRLTVNPEAWASRLGSDFIRNSKTVNVDFTSVHIYPDHWFREEVYEDYMKFVSKWMLSHIEDGDKILNKPVLFSEYGLSDTIKNFSLSNRENMYRVILNIIYKSAKKRRSGAGALVWQFLAGGMTEFLDDFGMVPWERSSTYSLFVEQACRLAKLNGWTQRDMSFKEFC* 428
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy13g1560 427 PANTHER - 4 427 IPR045053 GO:0004553
Ahy13g1560 427 SUPERFAMILY (Trans)glycosidases 39 404 IPR017853 -
Ahy13g1560 427 Gene3D Glycosidases 37 414 - -
Ahy13g1560 427 PANTHER GLYCOSIDE HYDROLASE FAMILY 5 PROTEIN 4 427 - -
Ahy13g1560 427 Pfam Cellulase (glycosyl hydrolase family 5) 52 376 IPR001547 GO:0004553|GO:0071704
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy13g1560 Ahy-Chr13 22487259 22491252 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy13g1560 3 427 Glycoside Hydrolase AT2G20680 68.235 0.0 624
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy13g1560 K19355 - gmx:100811461 769.615
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy13g1560 13 22487259 22491252 Ahy13g1560 13 22487259 22491252 ECH