Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy13g1543 ATGGTGGATGATACCTGTTTAATTGAATACATACTGGAGAAAAGACCAGAGCTAATCCATTTAAGAGATGAAAAAGGAAGTACTCCCCTTCATTATGCAGCATCCATTGACTATCTTAAAGGTGTCCAAATATTGTTAAGGAAAAGTACATCATCAAATGCTCTAGCATGGAACAAAAAGGGTCACCTTCCAATTCATGTTGCTTGCAAAAAGGGTCATGTTGACATAGTCAAAGAATTGCTCCAGCTAGAATGGCCCACGTCAATGGACATGTTCAGCAAGAAAGGTCAAAATATTCTTCATGTTGCTGCAAAGAATGGACAAGACAACGTGGTGAGGTTCATACTTAAAGAGAAGAAACTACTATTTGAGAAACACTTGGTTAACGAGAGAGATAGAAATGGAAACACTGCATTGCATTTGGCTGCAAAGCACTTGTACCCTCAGGTTCTTCTCTCCCTCACACGAGATAAAAGAGTTGATATGCAAATCATGAACAACCAAGGTTTAACTGCTCAAGATATTGTTCTAGTTCGGAGCAAAGCTCCACTGAAACATAGAGAGTATTTATCTCTGATGATTTTATATTCTGCCGGAGTACCACAAAGTGAGACGGCAAGAAGCATGTTGCGTCGCCGCAAAGAGCCACCAAAAATAGATTGGATCAAAGACAGAATCAACACACTTATGCTGGTGGCCATTCTTATAGCCACAGTCACATTCGCAGCTGGTTTTGCCTTACCAGGCAGTGTCTACAGTTCCGACGATCCAGACCCAAACCAAAGAGGCATGGCAGTTTTGGTTCATAAACCAATGTTTCAAGTGTTCTCAGTGTGCAACACGGTGGCAATGTACAGTTCTACCCTTGGCTCTTTTGTTCTCTTGTGGGCCCAACTTGGTGACTTTCATTTAGCAGGAAGTGCGTATAATTTCGCTTTGCACATGGTTGCTGTGGCTCTTGTAACTACCTCAACGGCTTTTATGGCAGCTGTGCGTTTAGTTGTGAGCAACGTGCCCTGGCTTGCCAATGTCATAACCGTAATTGGAAGCATCTTTCTGTTATTGATCGTTTTTTTCTATGTTTTGTTGATATTCCCGTTAGGAACTCGTCATCCAGTAATGAGACATGTGGCTATCATTCTTATTAGGATTCTTATTCCGTTTGCGGGAACTTACGATAAAGTGATAGCTAAGGAGCATGATTCAAACTCTATGCAAGTAGTGAACAAGGCCAAGCAACAAGAGTTGGTGTCTGATTAA 1260 0.4151 MVDDTCLIEYILEKRPELIHLRDEKGSTPLHYAASIDYLKGVQILLRKSTSSNALAWNKKGHLPIHVACKKGHVDIVKELLQLEWPTSMDMFSKKGQNILHVAAKNGQDNVVRFILKEKKLLFEKHLVNERDRNGNTALHLAAKHLYPQVLLSLTRDKRVDMQIMNNQGLTAQDIVLVRSKAPLKHREYLSLMILYSAGVPQSETARSMLRRRKEPPKIDWIKDRINTLMLVAILIATVTFAAGFALPGSVYSSDDPDPNQRGMAVLVHKPMFQVFSVCNTVAMYSSTLGSFVLLWAQLGDFHLAGSAYNFALHMVAVALVTTSTAFMAAVRLVVSNVPWLANVITVIGSIFLLLIVFFYVLLIFPLGTRHPVMRHVAIILIRILIPFAGTYDKVIAKEHDSNSMQVVNKAKQQELVSD* 420
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy13g1543 419 ProSiteProfiles Ankyrin repeat region circular profile. 95 117 - -
Ahy13g1543 419 SMART ANK_2a 95 124 IPR002110 GO:0005515
Ahy13g1543 419 SMART ANK_2a 134 164 IPR002110 GO:0005515
Ahy13g1543 419 SMART ANK_2a 25 54 IPR002110 GO:0005515
Ahy13g1543 419 SMART ANK_2a 60 91 IPR002110 GO:0005515
Ahy13g1543 419 Pfam Ankyrin repeats (3 copies) 60 117 IPR002110 GO:0005515
Ahy13g1543 419 ProSiteProfiles Ankyrin repeat profile. 60 82 IPR002110 GO:0005515
Ahy13g1543 419 Gene3D - 2 212 IPR036770 -
Ahy13g1543 419 ProSiteProfiles Ankyrin repeat profile. 25 57 IPR002110 GO:0005515
Ahy13g1543 419 ProSiteProfiles Ankyrin repeat profile. 95 117 IPR002110 GO:0005515
Ahy13g1543 419 PANTHER PROTEIN PHOSPHATASE 1 REGULATORY SUBUNIT 7 355 - -
Ahy13g1543 419 PANTHER ANKYRIN REPEAT-CONTAINING PROTEIN ITN1-LIKE 7 355 - -
Ahy13g1543 419 SUPERFAMILY Ankyrin repeat 8 179 IPR036770 -
Ahy13g1543 419 Pfam Domain of unknown function 220 333 IPR026961 -
Ahy13g1543 419 ProSiteProfiles Ankyrin repeat region circular profile. 60 82 - -
Ahy13g1543 419 ProSiteProfiles Ankyrin repeat region circular profile. 25 54 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy13g1543 Ahy-Chr13 22060868 22065249 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy13g1543 7 365 Miscellaneous Gene Families AT2G01680 26.667 2.35e-25 106
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy13g1543 - - ahf:112737652 807.749
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy13g1543 13 22060868 22065249 Ahy13g1543 13 22060868 22065249 ECH