Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy13g1519 ATGCCACAGCGACAAGAAACTTTGATGGAACCAAAAATGAACAATGGCAATGGCCATGGACATGGCTGTGCTATTGTGAATGGTTGTACTAGTGATGAAGTAATTGAGTGGTTTGAACAAGTGTCACAGAAGGGTGGTTCTGTTCAGAAAGAGATACTATCCCAGATTCTGAAACAGAACCATGGTGCTGAGTATGTGAAGAAATGGTTGGGGTATCACAACATCCAAGAAATGGATTCATCTGCATTGGAATCACTTTTCACTTCTGTGGTTCCAATTTCTTCTCATGCAGATTTTGAGCCTTTTATCCAAAGGATTGCAGATGGGGACACTAATCCTTTACTCACCCAACAACCTATTACCACTCTTTCCCTAAGTTCTGGTACTACAGAGGGAAGGCAGATCGTACCTTTTACCCGCCATAGTGCACAAACTACCCTTCAAATTTTCACCTTAGCAGCAGCATACAGATCAAGGGTTTATCCCATAAGAGAAGGAGGAAAGATTCTTGAATTCATATACAGCAGCAACACGTTCAAAACAAAAGGAGGCCTAACGGTAGGAACAGCCACAACACACTACTATGCAAGTGAAGAGTTCAAGATCAAACAAGAACAAACAAAATCTTTCACTTGTAGCCCGGCCGAAGTAATTTCCGGCGGGGACTACAAGCAATCGACATACTGCCACCTCCTCCTCGGCCTCTTCTTCTCCGACCAAGTCGAATTTATAACCTCTGCTTTTGTCTACAGCATAATCCAAGCATTTCGCAGCTTCCAGGAGCTTTGGTGTGAGATATGCAACGATATTAGATCCGGCTCGCTTAGCTCGCGAATTAAGTTGCCAAAGATGAGAAAGGCAGTTTTGGAAATCATTGGTCCAAACCCAATTTTGGCATCAAAATTGGAAAATATTTGCAAGGAGCTAGAATTGGTGGATTGGTTTGGTTTGATTCCAAAGCTTTGGCCAAATGCTAAGTATGTTTATTCAATAATGACAGGGTCTATGCTACCTTATGTGACAAAGCTTAGGCATTATGCAAATGGATTACCTTTGGTTAGTGCTGATTATGGGTCAACTGAGAGTTGGATTGGGGTTAATGTGGATCCAAGTTTGCCACCAGAGAAAGTAACATTCACCGTTGTTCCTACTTTCTCTTACTTTGAGTTCATTCCACTTTATAGACATAATAAGCAAGAAGATTACAGATCAATTGTTGCTGATGATTTTATTGAAGACAAGCCAATTCCACTTTCTCAGGTTAAAGCAGGACAAGAGTATGAAATTGTCCTTACAACTTTCACCGGACTATACAGGTGCAGATTAGGAGATGTGGTAGAGGTGGCAGGATTCCACAACGGGATCCCAAAACTGAACTTCGTATGCAGAAGGAAGTTAATTCTAACTGTAAACATAGACAAGAACACAGAGAAGGACCTCCAATTAGTAGTAGAGAGAGGGTCACAACTTCTGAACAGAGCAAAGAAAGCTGAGCTTGTTGACTTCACCAGCTACGCTCATGTCTCCAACGAACCCGGCCATTACGTGATCTTCTGGGAGATCGACGGTTACGCCGAGGACAGTTTGTTAGAGGCGTGTTGCACCGAGATGGACGCGTCGTTTGCCGATCACGGTTACGTGGTTTCTAGAAAGACCAAGTCAATAGGGCCCCTTGAGCTTTGCATTGTGGAGAGGGGAACATTCAAGAAGATTCTGGACAACTTCATTGCTAATGGGGCTGCTTTGAGCCAGTTCAAGACTCCTAGGTGCACTAGTAACCATGGCATGCTTAATATCCTTAGGGCTTGCGCCCTCAAGAAGTTTCGTAGCACTGCTTACAACACTTGA 1848 0.4324 MPQRQETLMEPKMNNGNGHGHGCAIVNGCTSDEVIEWFEQVSQKGGSVQKEILSQILKQNHGAEYVKKWLGYHNIQEMDSSALESLFTSVVPISSHADFEPFIQRIADGDTNPLLTQQPITTLSLSSGTTEGRQIVPFTRHSAQTTLQIFTLAAAYRSRVYPIREGGKILEFIYSSNTFKTKGGLTVGTATTHYYASEEFKIKQEQTKSFTCSPAEVISGGDYKQSTYCHLLLGLFFSDQVEFITSAFVYSIIQAFRSFQELWCEICNDIRSGSLSSRIKLPKMRKAVLEIIGPNPILASKLENICKELELVDWFGLIPKLWPNAKYVYSIMTGSMLPYVTKLRHYANGLPLVSADYGSTESWIGVNVDPSLPPEKVTFTVVPTFSYFEFIPLYRHNKQEDYRSIVADDFIEDKPIPLSQVKAGQEYEIVLTTFTGLYRCRLGDVVEVAGFHNGIPKLNFVCRRKLILTVNIDKNTEKDLQLVVERGSQLLNRAKKAELVDFTSYAHVSNEPGHYVIFWEIDGYAEDSLLEACCTEMDASFADHGYVVSRKTKSIGPLELCIVERGTFKKILDNFIANGAALSQFKTPRCTSNHGMLNILRACALKKFRSTAYNT* 616
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy13g1519 615 Pfam GH3 auxin-responsive promoter 37 593 IPR004993 -
Ahy13g1519 615 PANTHER INDOLE-3-ACETIC ACID-AMIDO SYNTHETASE GH3.10 30 614 - -
Ahy13g1519 615 PANTHER GH3 DOMAIN-CONTAINING PROTEIN 30 614 IPR004993 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy13g1519 Ahy-Chr13 21292179 21300490 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy13g1519 31 611 EF-hand Containing Proteins AT1G23160 34.564 2.24e-112 346
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy13g1519 K14487 - gmx:100813472 993.03
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy13g1519 13 21292179 21300490 Ahy13g1519 13 21292179 21300490 ECH
Ahy8g1612 8 33285996 33293636 Ahy13g1519 13 21292179 21300490 PCT
Ahy13g1519 13 21292179 21300490 Ahy8g1612 8 33285996 33293636 PCT