Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy13g1466 ATGGCTAGTGGTGGTGGAGTTGACTTTGAGGACTTGCTTCCGATGATGGCGACCAAGCTAGGAGGCGAGGGACTCGTAAAAGAACTATGCAACGGTTTTGAGTTGCTGATGGACAAAGAGAAAGGTGTGATCACGTTGGAGAGCTTAAGGAGTAATGCTGCGGCGGTTCTTGGGATTGAGGACATGAAGGAGGACGAGCTTGTGAGCATGATGAGGGAAGGTGACATCGACGGCGACGGCTACCTTTCGCAGATGGAGTTCTGTGTCTTGATGTTCAGGTTGAGCCCTGAGTTGATGGAAGAGTCTTGGTTTTTGATTGAACAGGCATTGCAAAATCATGATGATGAACTAGTTAGCAACAATAACAAGAACAAGAACAAGAACAATAGCAATTCTTCTATTTCATGA 408 0.4608 MASGGGVDFEDLLPMMATKLGGEGLVKELCNGFELLMDKEKGVITLESLRSNAAAVLGIEDMKEDELVSMMREGDIDGDGYLSQMEFCVLMFRLSPELMEESWFLIEQALQNHDDELVSNNNKNKNKNNSNSSIS* 136
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy13g1466 135 Pfam EF-hand domain pair 40 93 IPR002048 GO:0005509
Ahy13g1466 135 ProSitePatterns EF-hand calcium-binding domain. 75 87 IPR018247 -
Ahy13g1466 135 PANTHER CALCIUM-BINDING EF-HAND PROTEIN 4 121 - -
Ahy13g1466 135 MobiDBLite consensus disorder prediction 116 135 - -
Ahy13g1466 135 PANTHER CALCIUM-BINDING PROTEIN KIC 4 121 IPR044205 GO:0005509
Ahy13g1466 135 ProSiteProfiles EF-hand calcium-binding domain profile. 62 97 IPR002048 GO:0005509
Ahy13g1466 135 SMART efh_1 66 94 IPR002048 GO:0005509
Ahy13g1466 135 Gene3D - 7 127 - -
Ahy13g1466 135 SUPERFAMILY EF-hand 4 91 IPR011992 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy13g1466 Ahy-Chr13 19769684 19770585 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy13g1466 8 111 EF-hand Containing Proteins AT4G27280 64.423 4.93e-45 141
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy13g1466 K24345 - gmx:100527206 179.489
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy13g1466 13 19769684 19770585 Ahy13g1466 13 19769684 19770585 ECH