Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy13g1426 ATGGCTGCATCATCATTCTTTGTCCCTTCATCCATAATGGAAGAAGAAGCAAGATTTGAAGCGGAGGTAGCAGAGGTGCAAGCATGGTGGAACTCAGAGAGGTTCAAGCTAACAAAGAGACCATACACAGCAAGAGACGTGGTGTCCCTACGTGGCAACCTCAGACAAAGCTATGCATCAAACGAGATGGCGAAGAAGCTCTGGCGAACCCTCAAGACCCACCAAGCCAATGGCACTGCCTCCAGAACCTTCGGTGCACTTGACCCTGTTCAGGTCACCCAAATGGCTAAGCATTTGGACTCTATCTATGTGTCTGGCTGGCAGTGTTCCGCTACTCACACCACGACCAACGAACCTGGTCCTGATCTTGCTGATTACCCTTATGATACTGTCCCTAACAAGGTTGAACACCTCTTTTTTGCTCAACAGTACCATGACAGGAAGCAAAAAGAGGAGAGGATGAGAATGAGTAGGGAAGAGAGGGCAAGAACCCCTTATGTTGACTACCTGAGGCCAATAATAGCCGATGGTGACACCGGCTTCGGAGGCACCACCGCGACCGTTAAGCTATGCAAGCTCTTCGTGGAGCGCGGTGCCGCCGGCATCCACATTGAGGACCAGTCCTCAGTGACGAAGAAATGCGGCCACATGGCCGGAAAAGTACTTGTCGCCATAAGCGAACATATTAACCGGCTTGTGGCCGCAAGGCTTCAATTCGATGTGATGGGAGTGGAAACAGTTTTGGTGGCAAGAACCGACGCAGAAGCCGCTAATATGATCCAATCCAATATCGACACGCGGGACCATCAGTTTATACTGGGAGTCACAAACCAAAACCTTAGAGGGAAAAGCCTTGCAACTCTCATGCAGCAAGGAATGGCGGCCGGAAAGAGCGGCCACGAGCTACAAGCCCTGGAAGACGAGTGGATATCAATGGCAGGGCTAAAGACATTCTCTGAAGCTGTGGTGGACGCAATCAAAGCGATGAACATTGGGGAGGAGGAGAAGAGAAGGAAGATCAACGAATGGCTGCAGCATTCTCATTACGACAAGTGTCTCTCGAACGACGAAAGCAGAGAAATCGCTGAGAGATTAGGGGTAAGGAACTTGTTCTGGGACTGGGATCTGCCAAGAACAAGAGAAGGGTTCTACAGATTCAAAGGGTCAGTAACCGCTTCAATTGTGAGAGGTTCAGCTTTCGCTCCACATGCAGATCTAATTTGGATGGAAACAGCAAGCCCCAATCTGCAAGAATGTACGGAATTCGCGGAAGGGATCAAGTCGAGGAACCCGGAGATTCTTCTGGGCTACAACCTTTCGCCGTCGTTCAACTGGGATGCTTCTGGAATGAGCGACGAGCAGATGAGGGAGTTCATACCAAGAATTGCGAGGTTGGGGTATGTTTGGCAGTTCATAACTGTTGGAGGACTCCATTCCAATGCTCTCATTACTTCAACGTTTGCAAGGGATTTTGCAAACAGGGGAATGCTTGCTTATGTTGAAAGGATTCAGAGAGAAGAGAGGAACAATGGTGTTGATACTCTTGCTCATCAGAAATGGGCTGGTGCTAATTACTATGATAGGTACCTCAAGACTGTTCAGGGTGGTGTTGCTTCAACTGCTGCAATGGGCAAAGGAGTGACTGAAGAGCAGTTCAAAGAAACATGGACAAGACCAGGAGCTGAGAACATTGGTGCAAGCAGTGTGGTGGTTGCTAAGGCCAGAATGTGA 1731 0.4939 MAASSFFVPSSIMEEEARFEAEVAEVQAWWNSERFKLTKRPYTARDVVSLRGNLRQSYASNEMAKKLWRTLKTHQANGTASRTFGALDPVQVTQMAKHLDSIYVSGWQCSATHTTTNEPGPDLADYPYDTVPNKVEHLFFAQQYHDRKQKEERMRMSREERARTPYVDYLRPIIADGDTGFGGTTATVKLCKLFVERGAAGIHIEDQSSVTKKCGHMAGKVLVAISEHINRLVAARLQFDVMGVETVLVARTDAEAANMIQSNIDTRDHQFILGVTNQNLRGKSLATLMQQGMAAGKSGHELQALEDEWISMAGLKTFSEAVVDAIKAMNIGEEEKRRKINEWLQHSHYDKCLSNDESREIAERLGVRNLFWDWDLPRTREGFYRFKGSVTASIVRGSAFAPHADLIWMETASPNLQECTEFAEGIKSRNPEILLGYNLSPSFNWDASGMSDEQMREFIPRIARLGYVWQFITVGGLHSNALITSTFARDFANRGMLAYVERIQREERNNGVDTLAHQKWAGANYYDRYLKTVQGGVASTAAMGKGVTEEQFKETWTRPGAENIGASSVVVAKARM* 577
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy13g1426 576 CDD ICL_PEPM 76 258 IPR039556 GO:0003824
Ahy13g1426 576 PIRSF ICL 369 555 IPR006254 GO:0004451|GO:0019752
Ahy13g1426 576 PIRSF ICL 13 323 IPR006254 GO:0004451|GO:0019752
Ahy13g1426 576 Gene3D - 263 378 - -
Ahy13g1426 576 ProSitePatterns Isocitrate lyase signature. 212 217 IPR018523 GO:0003824
Ahy13g1426 576 PANTHER ISOCITRATE LYASE/MALATE SYNTHASE 13 555 IPR006254 GO:0004451|GO:0019752
Ahy13g1426 576 TIGRFAM isocit_lyase: isocitrate lyase 23 552 IPR006254 GO:0004451|GO:0019752
Ahy13g1426 576 SUPERFAMILY Phosphoenolpyruvate/pyruvate domain 12 536 IPR015813 GO:0003824
Ahy13g1426 576 Pfam Isocitrate lyase family 22 552 IPR006254 GO:0004451|GO:0019752
Ahy13g1426 576 Gene3D - 18 536 IPR040442 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy13g1426 Ahy-Chr13 18134692 18138928 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy13g1426 K01637 - gmx:100782793 1030.01
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy13g1426 13 18134692 18138928 Ahy13g1426 13 18134692 18138928 ECH