Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy13g1425 ATGGCTAGAAAAGGCCTTAGAATGTGCATGATTGTGTGCTCAATTTTCTTGATCGTTGTTGTGACAATCATTCTGGCCATATCTTTGACCATCTTAAAACCCAAAGACCCAGATATTAGTGTCCACCCATATGGCCTTGAAAATTTTCAGATTATACAACCCAATGTAACAGCTGTGCCACTTGGCATGGTGATCACTATAGTCAATCCCAATTATGGAACCTTCAATTACAAAAATACCACTGGCTATCTTAGTTATCATGACATCAACGTAGCCAAAGCTGTGGTAGTATCAGGATCTGTGCCTGCTCGTGGCTTATTTAATATTACCACTGTTGCAGGTATCATGACTCAAAAGTTGATGGATGATACACAATTTTGGTCAGACATTGAAGTTGGCACATTGAATTTTGAAGCAACTATCACTCTTCCTGGGAAAGTGACTATGCTCAAGATTTTCAAAAAGAAGGCCCTGGTTCATGTAGCATGTGACCTCTCTTTTAAGCTTAATTTAAGCTCCATTCATACTGATTCAAGCTGCATATCCAAGATCAAGCTTTGA 561 0.3904 MARKGLRMCMIVCSIFLIVVVTIILAISLTILKPKDPDISVHPYGLENFQIIQPNVTAVPLGMVITIVNPNYGTFNYKNTTGYLSYHDINVAKAVVVSGSVPARGLFNITTVAGIMTQKLMDDTQFWSDIEVGTLNFEATITLPGKVTMLKIFKKKALVHVACDLSFKLNLSSIHTDSSCISKIKL* 187
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy13g1425 186 PANTHER LATE EMBRYOGENESIS ABUNDANT (LEA) HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY 1 185 - -
Ahy13g1425 186 PANTHER LATE EMBRYOGENESIS ABUNDANT PROTEIN 1 185 - -
Ahy13g1425 186 SUPERFAMILY LEA14-like 19 111 - -
Ahy13g1425 186 Pfam Late embryogenesis abundant protein 65 163 IPR004864 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy13g1425 Ahy-Chr13 18130145 18130705 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy13g1425 - - aip:107634840 368.622
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy18g0743 18 8204875 8205452 Ahy13g1425 13 18130145 18130705 PCT
Ahy8g1526 8 32071709 32072269 Ahy13g1425 13 18130145 18130705 PCT
Ahy13g1425 13 18130145 18130705 Ahy18g0743 18 8204875 8205452 PCT
Ahy13g1425 13 18130145 18130705 Ahy8g1526 8 32071709 32072269 PCT