Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy13g1405 ATGGCAGAACCCAAAGTTAAGTATGATCGCCAACTCAGGATATGGGGTGAACAAGGACAGGCAGCACTTGAGAAATCTAGTATTTGCTTACTTAACTGTGGCCCTACTGGCTCTGAAACACTTAAGAATCTTGTTCTTGGTGGGATAGGAAGCATCACTGTAGTTGATGGATCTAAAGTTGAAGTGGGTGATCTTGGAAACAATTTTCTGGTGGATGAATCAAGTGTCGGGCAGTCAAAGGCAAAATGTGTTAGCTCATTTCTTCAAGAGCTAAACGATTCTGTTAAAGCAAAATTTGTAGAGGAGTATCCAGAGGCATTGATTGAGACAAACCCATCATTCTTTTCTCAGTTTACTTTGGTCATTGCCACACAGCTTGTCGAAAGTTCAATGATAAAGCTTGATCGAATCTGCCGGGAGGCAAACGTTATTTTGATCTTTGCTCGTTCCTATGGCCTTACAGGGTTTGTTCGAATTAGTTTGAAGGAGCATACTGTCATCGAGTCAAAGCCTGAGCATTTTCTGGATGACCTCCGGTTAAATAATCCTTGGCTTGAACTAAAGAGTTTTGCAGACAGCATTGACTTGACTGTGCAAGATCCTGTTGCTCATAAGCACATACCATATGTTGTCATTCTTGTCAAGATGGCTGATGAGTGGGCCAAAAGCCATGGTGGTAAGCTCCCATCAACAAGAGAACAAAAAAAGGAGTTCAAGGATCTTTTGAAGGCCAGGATGGTTTCACAAGATGAAGATAATTATAAAGAAGCTATTGAAGCATCATTCAAAGTGTTTGCTCCCCGAGGAATTAGTTTGGATTTGCAGAGGATACTAAATGATAGTTCTTCTGAGGTGGACTCTAATTCATCATATTTTTGGGTGTTGGTGGCTGCTCTGAAGGAATTCATTGCAAATGAAGGTGGTGGGGAGGCACCACTTGAAGGATCTATACCGGATATGACATCTTCCACCGAGCAATATATTAATTTGCAGAATATCTATCTAGCTAAGGCTGAGGCTGACTTTCTTGTAATGGAACAACTAGTGAGAAGTATCTTGAAGAAGATTGGTCGAGATTCAAATAGCATTCCAAAGGCAACAATTAGAAGTTTCTGTAAAAATGCAAGAAAACTCAGAGTTTGCAGGTACCGGTCAATTGAAGATGAATTTAATTCTCCAAACATACCTGAGTTGCAGAGCATTGCTGTAGGAATTTATATTTTGCTTCGTGCTGTGGACCGGTTTGCTGCTAATTACAACAGTTTTCCTGGACAGTTTGACAGTGCAACGGATGAGGATATGCCAAGATTGAAGAGTGCAGCTATTAGCCTCCTAAGTGACCTGGGATGCAATGGAGCCGCTTTGGCTGAGGACCTCATCAATGAGATGTGTCGATTTGGTGCAGCAGAGCTTCATGCTGTGGCTGCTTTGGTTGGTGGAATTGCATCCCAAGAAGTGATCAAGCTCATAACAAGGCAGTTTGTACCGATGTCCGGAACCTACATCTTCAATGGCATTGACCACAAGTCACAGCTGTTGTCCCTGTAA 1548 0.4212 MAEPKVKYDRQLRIWGEQGQAALEKSSICLLNCGPTGSETLKNLVLGGIGSITVVDGSKVEVGDLGNNFLVDESSVGQSKAKCVSSFLQELNDSVKAKFVEEYPEALIETNPSFFSQFTLVIATQLVESSMIKLDRICREANVILIFARSYGLTGFVRISLKEHTVIESKPEHFLDDLRLNNPWLELKSFADSIDLTVQDPVAHKHIPYVVILVKMADEWAKSHGGKLPSTREQKKEFKDLLKARMVSQDEDNYKEAIEASFKVFAPRGISLDLQRILNDSSSEVDSNSSYFWVLVAALKEFIANEGGGEAPLEGSIPDMTSSTEQYINLQNIYLAKAEADFLVMEQLVRSILKKIGRDSNSIPKATIRSFCKNARKLRVCRYRSIEDEFNSPNIPELQSIAVGIYILLRAVDRFAANYNSFPGQFDSATDEDMPRLKSAAISLLSDLGCNGAALAEDLINEMCRFGAAELHAVAALVGGIASQEVIKLITRQFVPMSGTYIFNGIDHKSQLLSL* 516
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy13g1405 515 CDD APPBP1_RUB 7 513 - -
Ahy13g1405 515 SUPERFAMILY Activating enzymes of the ubiquitin-like proteins 7 511 IPR035985 GO:0008641
Ahy13g1405 515 Pfam ThiF family 8 493 IPR000594 -
Ahy13g1405 515 PANTHER NEDD8-ACTIVATING ENZYME E1 REGULATORY SUBUNIT AXR1 2 515 - -
Ahy13g1405 515 Gene3D - 351 515 - -
Ahy13g1405 515 Gene3D - 2 270 - -
Ahy13g1405 515 PANTHER UBIQUITIN-ACTIVATING ENZYME E1 2 515 IPR045886 -
Ahy13g1405 515 PIRSF APP-BP1 1 515 IPR030667 GO:0019781|GO:0045116
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy13g1405 Ahy-Chr13 17707923 17715505 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy13g1405 7 195 EF-hand Containing Proteins AT2G30110 24.121 5.47e-07 50.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy13g1405 K04532 - gmx:100793799 908.672
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy13g1405 13 17707923 17715505 Ahy13g1405 13 17707923 17715505 ECH