Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy13g1404 ATGAACAACGGAAACAAGATGCGAGCGGCATTCATAATTGCGACTGTAACAGCAATCTCCATCTTCTTAACCGCAATGAACCGCAGAAGAATCCGTAACCGTAACAAGAAATCACCTTCGAGTTCGTGTTATTTACATTCCGAACCGAAGCCGCAGAGTTCCTTTAAGCGCGTCTTGGCGGATAATTCTTACACTCCTTTCAAGCACTTGAAGAATCTCAACGACTCTTCTAACAATGATAAAGCTTCAAATTTGCATCCATTTGAGGCAGTGATCACAGCATTGTTGAAAAATTCTTGGCCTGAAATTGAACTTACTACTGAGATTGTGGACATGGAAATGAATGATTCTTATGTTTGGGTCAATACAGAGCTGCAAGTAAAGGAATTGGCCAATGTGTTAAGCAAAGAGAGATTCTTTGCTGTGGACACAGAACAACATAGCTTACGATCTTTTCTAGGCTTTACAGCATTGGTTCAGATTTCTACCCAGAAGAAAGATTATTTGGTTGACACAATCGCGCTACATGATCTAATGCCAATTCTTTGCCCAGTTTTTGCGGATCCTTCTATTTGTAAAGTGTTCCATGGGGCTGACAATGATGTTGTCTGGCTACAAAGGGACTTCCATATATATGTTGTTAATCTATTTGATACTTCAAAGGCATGCGAGGTGCTGTCAAAGCCACAGAAATCACTTGCTTATCTACTTGAAACTTACTGCAGTGTGACAACAAATAAATTATTACAGCGTGAAGACTGGAGACAGCGCCCCCTCTCAGCAGAAATGGTGCATTATGCACGAACAGATGCACACTATTTGTTGTATATTGCAAACTGTTTGATTGCTGAGCTCAAACAACTTGACAATGAAAACTCTTGTGACGATGACAAATTCCATTTTGTTCACGAGGCTAGTCGGCGTTCAAACATAATCTGTTTGCAACTTTTTACAAAAGAAGTTGAAGCTTCTCCTGGTGATTCTGCTGCATCATCATTATTTTCTCGTCATGTGAGTGGTCAAGGCTTCACTTCAGTTTCCAATGAATCCCAGTTTCAGACTATTGTGAAGCAACTGTGTGGATGGAGAGACCTGATGGCTCGCATTCATGATGAGAGCTTAAAATATGTACTGTCAGACCAGGCAATTGTTGCTTTGGCAAGTCAACCTTTGTCAAGTGAATCCGAAATATACAATCTCATAGCTCTGGTTGATAATAATGTGGAAATGGGTCTCAATTTTTTCATCCATTCCCCATCTCCTGTTGTTTGCAGCCACTTGAGTGATATCCATCATATTCTTGCAGACAAGTTGATTGACCATGCTCACATTTATTCATGGATTATTCAAAAGTGCCTGGGTCCAAATGGGACTTGTCCACTTTCTATATTTAATTATGCTTTGCTGTTTAACAGTAACTTAAAACCTAGCTTAGCTTATAAACCCTCTGGTCTAAAAAATCATAGACAGATATCCCGGAAAGCTTCTCGAGATTTGTTTGTTCAAAAATTCTCCTGTAAGGCTCCTGTTTATCATAACTGCCGGATATTTGCTAATGATGGGAGGCTGCTTTGTTACTGTGATAAGAAGAAGCTTGAGTGGTACCTAAGTCGGGATCTCGCAAAACTTGTTGATAAGGACCCACCAGCTATAATGCTTCTATTTGAACCCAAAGGTCGCCCAGAGGATGAAGACAATGATTTCTACATTCAGAGCAAGAGAAATATATGTGTTGGATGTGGTGAAGGAAGTCACTACTTACGGTACCGAATAATCCCATCCTGTTACAGAATGCATTTTCCTGAGCATTTAAAAAGCCATCGTTCTCATGATATTGTTCTACTCTGCGTGGACTGCCACGAAATTGCCCATGCGGCTGCAGAGAAGTATAAGAGAAAAATAGCTGCTGAATTTGGAATTCCTCTGTACGTTCAAAGGGTCGTTCATCCTGAACAAGAGCCTAATATACAGATTGAGGAGGGTGTATCTCCATTACAGTTACGTACAGCAGCTATGGCTCTTATACGCCATGGACCAAGAATGCCTCAAAATCGCCGTGAAGAACTGACTGAGGTTGTGAAGAGATATTATGGAGGAAGAGAAATATCTGAGGAAGATCTAGAAAGAGCCCTGATAGTTGGCATGAGTCCTCATGAGAGAAGACGGTTTGAGAAGAAGAGGGGTTTCTCTTTCAGACATGTGGGTAAAATAACAGCAGTGTCTGAAGAGGAAAACCCTGCTGATTCCACAACCAGAATTAGTAATGGGGATGCATCAAAGGTTGGTTCCCTTGATGATGGTTCATGTGCAAATGAAGAAACAAGTAATGATGTAGATAGAGAACATTTGATGGTAAACGATGATTCAGGAAACCCTTCTTTAGCTTCTGATCTTGCAGTTGATGCATCTGTCTCTCCTGATACTTCAAATGGGTACACAAGCTCATTTGAAATTGTGGATTATAGTGAAATTAGTGACTCTGTTACAAATGTTGATGGCACTAGTCTGAGTAAAAAGCAACCAAATGGAAGTGATGACTTATCTTATCCTCCCAACGATGAAGAATCGACTCAAACTAAACATAATTCAAAACAATCACTCTTAGGACATGGACCGCATGGACAAGAAGTTGTAGAACATTTAATGAAGGAATATGGGGAAGAAGGCATTGGACAGTTCTGTCAACGGTGGAGACAAGTATTTGTTGAAGCTGTAAATCCACGTTTTCTTCCTGCTGGTTGGGATGTAAAACACAGCGGAAGAAGGGACTTCGGTGAGTTCAGTGTATACAATCCTGGCAGAAGAGTTGGCGCTACTACTTAG 2823 0.407 MNNGNKMRAAFIIATVTAISIFLTAMNRRRIRNRNKKSPSSSCYLHSEPKPQSSFKRVLADNSYTPFKHLKNLNDSSNNDKASNLHPFEAVITALLKNSWPEIELTTEIVDMEMNDSYVWVNTELQVKELANVLSKERFFAVDTEQHSLRSFLGFTALVQISTQKKDYLVDTIALHDLMPILCPVFADPSICKVFHGADNDVVWLQRDFHIYVVNLFDTSKACEVLSKPQKSLAYLLETYCSVTTNKLLQREDWRQRPLSAEMVHYARTDAHYLLYIANCLIAELKQLDNENSCDDDKFHFVHEASRRSNIICLQLFTKEVEASPGDSAASSLFSRHVSGQGFTSVSNESQFQTIVKQLCGWRDLMARIHDESLKYVLSDQAIVALASQPLSSESEIYNLIALVDNNVEMGLNFFIHSPSPVVCSHLSDIHHILADKLIDHAHIYSWIIQKCLGPNGTCPLSIFNYALLFNSNLKPSLAYKPSGLKNHRQISRKASRDLFVQKFSCKAPVYHNCRIFANDGRLLCYCDKKKLEWYLSRDLAKLVDKDPPAIMLLFEPKGRPEDEDNDFYIQSKRNICVGCGEGSHYLRYRIIPSCYRMHFPEHLKSHRSHDIVLLCVDCHEIAHAAAEKYKRKIAAEFGIPLYVQRVVHPEQEPNIQIEEGVSPLQLRTAAMALIRHGPRMPQNRREELTEVVKRYYGGREISEEDLERALIVGMSPHERRRFEKKRGFSFRHVGKITAVSEEENPADSTTRISNGDASKVGSLDDGSCANEETSNDVDREHLMVNDDSGNPSLASDLAVDASVSPDTSNGYTSSFEIVDYSEISDSVTNVDGTSLSKKQPNGSDDLSYPPNDEESTQTKHNSKQSLLGHGPHGQEVVEHLMKEYGEEGIGQFCQRWRQVFVEAVNPRFLPAGWDVKHSGRRDFGEFSVYNPGRRVGATT* 941
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy13g1404 940 PANTHER PROTEIN RRP6-LIKE 3 2 935 - -
Ahy13g1404 940 MobiDBLite consensus disorder prediction 740 796 - -
Ahy13g1404 940 Pfam 3'-5' exonuclease 118 285 IPR002562 GO:0003676|GO:0006139|GO:0008408
Ahy13g1404 940 Pfam HRDC domain 354 408 IPR002121 GO:0003676
Ahy13g1404 940 PANTHER POLYMYOSITIS/SCLERODERMA AUTOANTIGEN-RELATED 2 935 IPR045092 GO:0000175|GO:0000467
Ahy13g1404 940 Gene3D - 48 323 IPR036397 GO:0003676
Ahy13g1404 940 SMART 35exoneu6 118 286 IPR002562 GO:0003676|GO:0006139|GO:0008408
Ahy13g1404 940 MobiDBLite consensus disorder prediction 829 869 - -
Ahy13g1404 940 Gene3D HRDC domain 343 442 IPR044876 -
Ahy13g1404 940 MobiDBLite consensus disorder prediction 829 872 - -
Ahy13g1404 940 MobiDBLite consensus disorder prediction 743 758 - -
Ahy13g1404 940 SUPERFAMILY HRDC-like 349 413 IPR010997 GO:0000166|GO:0044237
Ahy13g1404 940 ProSiteProfiles HRDC domain profile. 349 429 IPR002121 GO:0003676
Ahy13g1404 940 SUPERFAMILY Ribonuclease H-like 50 288 IPR012337 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy13g1404 Ahy-Chr13 17699162 17706528 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy13g1404 K12951 - gmx:100791485 1371.3
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy13g1404 13 17699162 17706528 Ahy13g1404 13 17699162 17706528 ECH