Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Ahy13g1292 | ATGGCTGAGGAACCACAGAAACCAGCTGAGGAAGTGGTGGCCGCCGTAGCTCAGCCTGAGACCGAGGCCCAGCCGGACAAACCTGTTCCTGAGACAGATAAGGAGACACAGGCCGATAAGGCAGAGGCGGCAGTGCCTGAGGCTGAGAAGAAGGAGGGCGATGCTGTTGTAGTGACAGAGAAGGCAGTGGAAGGAGAAGCGGCGGAGTCGGAGGCGGAGAAGCCCGTTGAAGGGAAAAATCAGATAGCGCAATCGGTGTCTTTCAAGGAGGAGAGCTACGTGGTTGGCGACCTCCCCGAAGCACAGAAGAAGGCTCTCGATGACCTCAAGAACCTCATTCAAGAAGCCCTCAATAAGCACGAGCTCTCCTCTCCTCCTCCCCCTCCACCGCCAAAAGAAGAAGACAAGAAGAAAGAAGAGGCCGTTGCAGCTGCCGAAGAGAAGAAGGAAGAGGTAGAAGAGAAGAAGGAGGAAGCTGCAGCAGCCGAGGAAGAGAAGAAGGAAGAGGTGGTAGCAGCTGAGGAGAAGAAGGAAGAGGTGGTAGCGGCAGCTGATGAGAAGAAGGAGGAAGCTACGGCAGCCGAGGAAGAGAAGAAGGAGGAAGCTGCGGCAGCCGAGGAAGAGAAGAAGGAAGAGGTGGCAGCAGCAGCTGAGGAACCTAAAGTGGAAGAAAAAGCAGAAGCGGAAGTGAAGAAGGAGACGGTGGAGGTGGTGGAGAAAACAGAGGACGGTGCCAAGACGGTAGAAGCCATAGGGGAGAGCGTAGTGTCAGTGAAAGTGGAGGAAGAAGGTCCTTCAAGTTCAGCAGTAGCCGTGGAGGAGGACAAGAAGGAAGAAGAGGCAGCTCCTCCTCCGCCGCAAGCTCCAGAGGAAGTGTCGATATGGGGAATCCCACTGCTGGCAGACGAGAGGAGTGACGTCATCCTGCTCAAGTTCCTGAGAGCGAGGGACTTCAAGGTGAAGGACGCCTTCACGATGATCAAGAACACCGTCCGATGGCGCAAGGAATTCGGAATCGAGTCCCTGATCGAGGAAGATCTCGGAAGCGATTGGGACAAGGTGGTGTTCACTCAAGGGGTCGATAAAGAAGGCCACCCGGTGTGCTACAACGTCTTCGGAGAATTCGAGAACAAGGAGCTTTACCAGAAGACGTTCTCCGACGAGGAGAAGCGCCAGAAATTCATCAGGTGGAGGATCCAGCTTCTGGAAAAGAGCGTCAGGAAGCTTGACTTCAGTCCGAGAGGGATCTCCACCATCGTGCAGGTCAACGATCTCAAGAACTCACCTGGACTGAGCAAGAGGGAGCTCAGGCAGGCTACTAACCAGGCCCTCCAACTGCTTCAGGATAACTACCCTGAGTTCGTTGCCAAGCAGGTGTTTATCAATGTGCCATGGTGGTACCTTGCCTTTTCAAGGATGATAAGTGCTTTCCTGACCCAGAGGACCAAGAGCAAATTTGTATTTGCTGGACCATCCAAATCTGCTGAAACCCTTTTCAAGTACATAGCCCCGGAGCAAGTGCCGGTTCAATACGGTGGACTAAGCAGAGAGGGTGAGCAAGAATTCAGTACCGCCGATCCTGTTACAGAGGTTACAATCAAACCAGCAACAAAGCACACCGTCGAGTTCTCATTTGCTGAGAAGAGCCACCTTGTCTGGGAGCTTAGAGTTGTGGGTTGGGATGTGAGCCACGGGGCTGAATTTGCGCCCAGCGCCGACGATGGATACACGGTGATAGTACAGAAGAGCAGGAAAATCGCCCCGGCGGATGAAACAGTGATTTGCAACAGCTTCAAAGTGGGTGAACCTGGCAAGGTCGTGCTCACCATCGATAACCAAACATCCAAGAAGAAGAAACTCCTCTACAGGTCCAAGACCACACCCATCTCTGAATAG | 1896 | 0.5353 | MAEEPQKPAEEVVAAVAQPETEAQPDKPVPETDKETQADKAEAAVPEAEKKEGDAVVVTEKAVEGEAAESEAEKPVEGKNQIAQSVSFKEESYVVGDLPEAQKKALDDLKNLIQEALNKHELSSPPPPPPPKEEDKKKEEAVAAAEEKKEEVEEKKEEAAAAEEEKKEEVVAAEEKKEEVVAAADEKKEEATAAEEEKKEEAAAAEEEKKEEVAAAAEEPKVEEKAEAEVKKETVEVVEKTEDGAKTVEAIGESVVSVKVEEEGPSSSAVAVEEDKKEEEAAPPPPQAPEEVSIWGIPLLADERSDVILLKFLRARDFKVKDAFTMIKNTVRWRKEFGIESLIEEDLGSDWDKVVFTQGVDKEGHPVCYNVFGEFENKELYQKTFSDEEKRQKFIRWRIQLLEKSVRKLDFSPRGISTIVQVNDLKNSPGLSKRELRQATNQALQLLQDNYPEFVAKQVFINVPWWYLAFSRMISAFLTQRTKSKFVFAGPSKSAETLFKYIAPEQVPVQYGGLSREGEQEFSTADPVTEVTIKPATKHTVEFSFAEKSHLVWELRVVGWDVSHGAEFAPSADDGYTVIVQKSRKIAPADETVICNSFKVGEPGKVVLTIDNQTSKKKKLLYRSKTTPISE* | 632 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Ahy13g1292 | 631 | MobiDBLite | consensus disorder prediction | 259 | 291 | - | - | |
| Ahy13g1292 | 631 | MobiDBLite | consensus disorder prediction | 1 | 232 | - | - | |
| Ahy13g1292 | 631 | Pfam | CRAL/TRIO, N-terminal domain | 282 | 329 | IPR011074 | - | |
| Ahy13g1292 | 631 | ProSiteProfiles | CRAL-TRIO lipid binding domain profile. | 344 | 519 | IPR001251 | - | |
| Ahy13g1292 | 631 | MobiDBLite | consensus disorder prediction | 101 | 115 | - | - | |
| Ahy13g1292 | 631 | PANTHER | PATELLIN-LIKE PROTEIN | 1 | 631 | - | - | |
| Ahy13g1292 | 631 | SMART | CRAL_TRIO_N_2 | 305 | 330 | IPR011074 | - | |
| Ahy13g1292 | 631 | SUPERFAMILY | Supernatant protein factor (SPF), C-terminal domain | 528 | 626 | IPR036598 | - | |
| Ahy13g1292 | 631 | MobiDBLite | consensus disorder prediction | 26 | 76 | - | - | |
| Ahy13g1292 | 631 | Gene3D | - | 272 | 336 | - | - | |
| Ahy13g1292 | 631 | CDD | SEC14 | 350 | 514 | IPR001251 | - | |
| Ahy13g1292 | 631 | SMART | sec14_4 | 348 | 516 | IPR001251 | - | |
| Ahy13g1292 | 631 | Coils | Coil | 135 | 219 | - | - | |
| Ahy13g1292 | 631 | PANTHER | PATELLIN-1 | 1 | 631 | IPR044834 | GO:0008289 | |
| Ahy13g1292 | 631 | MobiDBLite | consensus disorder prediction | 130 | 232 | - | - | |
| Ahy13g1292 | 631 | MobiDBLite | consensus disorder prediction | 269 | 284 | - | - | |
| Ahy13g1292 | 631 | ProSiteProfiles | GOLD domain profile. | 495 | 626 | IPR009038 | - | |
| Ahy13g1292 | 631 | SUPERFAMILY | CRAL/TRIO N-terminal domain | 95 | 346 | IPR036273 | - | |
| Ahy13g1292 | 631 | SUPERFAMILY | CRAL/TRIO domain | 354 | 515 | IPR036865 | - | |
| Ahy13g1292 | 631 | Pfam | CRAL/TRIO domain | 353 | 513 | IPR001251 | - | |
| Ahy13g1292 | 631 | Gene3D | GOLD domain | 519 | 627 | - | - | |
| Ahy13g1292 | 631 | Gene3D | - | 349 | 518 | IPR036865 | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Ahy13g1292 | Ahy-Chr13 | 15295729 | 15298650 | Tandem |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Ahy13g1292 | 309 | 508 | Acyl Lipid Metabolism Gene Families | AT1G55840 | 28.837 | 3.44e-07 | 50.4 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Ahy13g1292 | - | K19996 | rcu:8281630 | 608.986 |