Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy13g1274 ATGAGAATGGCGAATTTGAAATACCTGAGTAGGAGAGCGTTGCTTGGGTGGAGTTGGAAGGTAGAAGGAAGCAGTTATCGGCTTTATTCGAAGGCAAGCACTGCCTCTGCTGCTACGACAGATGACCGCGGTGAAGGTGAGGATGCTGCTCCCACTTCGGGGATCTGTAGGCCGCTCTCGGAGATACTGAAGGAGCTTAATAAGAAAGTCCCCGATTCTCTCGTCAAAACCCGTGTTGAGTCCGACGGATTTGCCATCCGATACATTCCCTGGCACACTGTCAACCGCATTTTAAACTTACACGCTCCAGAGTGGTCTGGTGAAGTTCGCAACATCTCCTACTCCGCCGACGCCAAGTCTGTCTCTGTTGTCTACCGCATTACCCTCTATGGCACTGATGCTGAGATATTTAGAGAATCAACTGGTACTGCTTCAATAGATGACACAAGTTATGGAGATCCTGTACAGAAGGCAGAAGCAATGGCTTTTCGTAGAGCTTGTGCACGCTTTGGCCTAGGACTCCATCTTTATCATGAAGATGTATCATGA 549 0.4882 MRMANLKYLSRRALLGWSWKVEGSSYRLYSKASTASAATTDDRGEGEDAAPTSGICRPLSEILKELNKKVPDSLVKTRVESDGFAIRYIPWHTVNRILNLHAPEWSGEVRNISYSADAKSVSVVYRITLYGTDAEIFRESTGTASIDDTSYGDPVQKAEAMAFRRACARFGLGLHLYHEDVS* 183
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy13g1274 182 Pfam Rad52/22 family double-strand break repair protein 60 180 IPR041247 -
Ahy13g1274 182 PANTHER - 30 181 IPR037489 GO:0000724|GO:0003677
Ahy13g1274 182 Gene3D DNA repair protein Rad52/59/22 57 182 IPR042525 -
Ahy13g1274 182 PANTHER DNA REPAIR RAD52-LIKE PROTEIN 1, MITOCHONDRIAL 30 181 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy13g1274 Ahy-Chr13 15007435 15008966 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy13g1274 - - adu:107477634 344.354
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy13g1274 13 15007435 15008966 Ahy13g1274 13 15007435 15008966 ECH