Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy13g1265 ATGGTGGATAAGCCAATGAGCAATCACAGAACCCGTTTCCCTTTCTCCATCAACAAGCTCATCTTCTGGTCTCTCATCTCCCTCGCCGTCATCCTCTTCTTCTTCGTCGGATCTCCACCTTCCACCGCCACCACCACCACCTCCTCCTCCCACTCCCGCCGCTCCCTCCGCGGCGGTCCTCAGTGGCAAACCTCCGTCATTCGCTCTTCCACGCCGTCAAATCCCAAAGGTCTCCGCGTCCTAGTAACCGGCGCCGCCGGCTTCGTCGGCAGCCATGTCTCAGTGGCACTCAAGCGCCGCGGCGACGGCGTTGTCGGCATCGACAACTTCAACCGCTACTACGACCCATCGTTAAAACGTTCACGCGCCGATCTACTAACGCGTGAGGGCGTGTTCGTTGTGGAAGGCGATATCAACGATTCATCGCTCTTGAAATCGCTCTTCAAGCTCGTGAAGTTCACGCACGTGATGCACCTCGCGGCACAAGCCGGAGTTCGTTACGCCATGAAGAACCCTTCCTCTTACATCCACAGCAACATCGCAGGCTTCGTGAACCTTCTAGAAACTTGCAAGAGCGTGAACCCTCAACCCGCTATAGTCTGGGCTTCTTCAAGCTCCGTTTACGGCCTCAACTCGAAGGTTCCATTCTCCGAGAAAGATCGCACGGACCAACCCGCAAGCTTATACGCCGCAACGAAGAAAGCAGGTGAAGAAATCGCGCACACTTATAACCATATCTATGGACTTTCCATGACAGGCTTGAGATTCTTCACTGTTTATGGACCTTGGGGGAGGCCTGACATGGCGTATTTCTTCTTCACGAGGGACATTCTGAAGGGAAAACAGATTCAGATATTTGAAGGCGCAGAGCATAGATCGGTGGCGAGGGATTTTACTTACATTGATGATATTGTGAAGGGCTGTTTGGGGGCTTTGGATACTGCTGAGAAGAGCACTGGGAGTGGTGGCAAGAAGAGTGGGCCTGCGCAGTTGCGGATTTTTAATCTTGGAAATACTGCTCCGGTGCCGGTTGCGAAGCTGGTGAGTATTCTGGAGAAGTTGTTGAAGGTTCATGCCAAGAAGAAGGTTATGGCTATGCCTAGGAATGGGGATGTTCCTTTTACACATGCTGATATAAGTTTGGCCAAGAAAGAGATTGGGTATAAGCCTGGTACCGATTTGGAGAAGGGTTTGAACAAGTTTGTGACTTGGTATTTGGCTTATTATTCTAATGAATCTGGGAAGAAAGATAGGCTAAGTTCTTGGTGA 1269 0.513 MVDKPMSNHRTRFPFSINKLIFWSLISLAVILFFFVGSPPSTATTTTSSSHSRRSLRGGPQWQTSVIRSSTPSNPKGLRVLVTGAAGFVGSHVSVALKRRGDGVVGIDNFNRYYDPSLKRSRADLLTREGVFVVEGDINDSSLLKSLFKLVKFTHVMHLAAQAGVRYAMKNPSSYIHSNIAGFVNLLETCKSVNPQPAIVWASSSSVYGLNSKVPFSEKDRTDQPASLYAATKKAGEEIAHTYNHIYGLSMTGLRFFTVYGPWGRPDMAYFFFTRDILKGKQIQIFEGAEHRSVARDFTYIDDIVKGCLGALDTAEKSTGSGGKKSGPAQLRIFNLGNTAPVPVAKLVSILEKLLKVHAKKKVMAMPRNGDVPFTHADISLAKKEIGYKPGTDLEKGLNKFVTWYLAYYSNESGKKDRLSSW* 423
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy13g1265 422 PANTHER EPIMERASE-RELATED 4 413 - -
Ahy13g1265 422 MobiDBLite consensus disorder prediction 44 72 - -
Ahy13g1265 422 PANTHER UDP-GLUCURONATE 4-EPIMERASE 2-RELATED 4 413 - -
Ahy13g1265 422 PRINTS Nucleotide sugar epimerase signature 106 122 - -
Ahy13g1265 422 PRINTS Nucleotide sugar epimerase signature 296 311 - -
Ahy13g1265 422 PRINTS Nucleotide sugar epimerase signature 331 346 - -
Ahy13g1265 422 PRINTS Nucleotide sugar epimerase signature 371 388 - -
Ahy13g1265 422 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 73 410 IPR036291 -
Ahy13g1265 422 Pfam GDP-mannose 4,6 dehydratase 81 400 IPR016040 -
Ahy13g1265 422 Gene3D - 78 411 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy13g1265 Ahy-Chr13 14856798 14859141 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy13g1265 1 416 Miscellaneous Gene Families AT1G02000 74.584 0.0 634
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy13g1265 K08679 - gmx:100819586 616.305
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy13g1265 13 14856798 14859141 Ahy15g0963 15 14570602 14572272 ECH
Ahy13g1265 13 14856798 14859141 Ahy13g1265 13 14856798 14859141 ECH