Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy13g1229 ATGTCGAAGGACAAGGACTCTACCAATTTGTCACGCACCTTCAAATACCTCTTAGCTACTCAATTCTTGTCAAGAGGAATTCCATTTATATTCAATACATGGATTGTAAGGCATCTTACACAAGAAGACTATGCGCTATATGCAGTGCAGTTTCATCTGTTTGTCACATGTGTTTTATTTCTTAGTCGGGAAGGCTTCCGGCGAGCATGCTTGCGCATGGAAATGCAAAGTGATGGCAATACAAAAGATGTTGTGAAGCTAATGAAAGTGGTGTGGATGAGTTTCCCGCTTGGAATATTTATTACAATAGTGGCATGCTCTTTTGTTCTATGGTTGCAAGGCCTAAGTTATTCTAGTTCACTTGGGCAAGCTGTGTTGATCAATGGTCTTGCATGCATTTTGGAGCTTTTAGCTGAGCCTTTGTATATTCTTTCACAGAACTTGGTCTTGCTTGAATTAAGATTGATGGTTGAGACAGTAGCTACTATTTCACGATGCTTGACAATGTACTTTCTACTTGTCAAGAAATCTCAAATGGAAAAACCAATCATATTTGCATTATCACAATCTGTGTATGGAGCCTGCTTATTTATTGGCTACTGGGGTTATCTCATTCTTTTCAGCAAATTCAAATGTTCTTACCTTTTCCCATTCAGAGAAGGAAAACTGATTGACTTTGATAAGCAGCTGTCCAAGATGTGCATGTTGTTTACCTTTCAATCTTATCAAAAGTTGATTCTTCAGGAAGGAGAAAAAATGGTGCTTGTGTGGTTGGATACACCATATAATCAAGCAGTATATGGTCTTGTGGACAAATTAGGTAGCTTAGTGGTGAGACTAGTCTTTTTACCTTTTGAAGAAAGTTCATATGTAACCTTTGCAAGGTCTGCTTCAGGACAATATCCAGGGAAGAGCAAGAAATTAGGAAACTGCTTGATGGAGTCCCTCAAGTTAGTTTTGTTGATTGGCCTTGTCTTTATGGCATTTGGTCCAAGTTATTCTTATTCGCTCATTAGATTGCTGTATGGTGAAAAATGGAGTGATGGGGAAGCGTCAACTGCTCTCCGCTACTACTGCCTTTATGTCATTGTCTTGGCTATCAATGGAACATCTGAAGCCTTCTTGCATTCAGTTGCAACAGAGAGCCAACTAAAGCGTTCAAATCATTCATTAGTTGTATTCTCGGTGATCTATGTAGTTTTGAATGTCCTGCTAATAAGAATAGCTGGGGCAGTTGGCTTAATTATGGCAAATTCTCTCAATATGACCTTGAGGATTTCATACTCTGCTGTATTCATTAAAAATTATTTCAAGGAATCTTCCTCATTTTCATTCTCGAGCTGCTTGCCTTCAGGATGGACTTTTCTGTTAATTTCAGGTGTAATCACTCTCATTTCTGAGAATATATTTCTGGACCAAGAAAACTTCTGGCCAACATTCATGATCCATTTGTCTGTTGGGCTGGCTTGCTTCTGCATTTCATCTTATGTGATCTACCAACGGGAAAAACCGTTCATCAAAAGGATTATTCGTTTTCGTGATCACTCAGACTGA 1554 0.388 MSKDKDSTNLSRTFKYLLATQFLSRGIPFIFNTWIVRHLTQEDYALYAVQFHLFVTCVLFLSREGFRRACLRMEMQSDGNTKDVVKLMKVVWMSFPLGIFITIVACSFVLWLQGLSYSSSLGQAVLINGLACILELLAEPLYILSQNLVLLELRLMVETVATISRCLTMYFLLVKKSQMEKPIIFALSQSVYGACLFIGYWGYLILFSKFKCSYLFPFREGKLIDFDKQLSKMCMLFTFQSYQKLILQEGEKMVLVWLDTPYNQAVYGLVDKLGSLVVRLVFLPFEESSYVTFARSASGQYPGKSKKLGNCLMESLKLVLLIGLVFMAFGPSYSYSLIRLLYGEKWSDGEASTALRYYCLYVIVLAINGTSEAFLHSVATESQLKRSNHSLVVFSVIYVVLNVLLIRIAGAVGLIMANSLNMTLRISYSAVFIKNYFKESSSFSFSSCLPSGWTFLLISGVITLISENIFLDQENFWPTFMIHLSVGLACFCISSYVIYQREKPFIKRIIRFRDHSD* 518
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy13g1229 517 CDD MATE_rft1 9 439 - -
Ahy13g1229 517 PANTHER ENDOPLASMIC RETICULUM MULTISPAN TRANSMEMBRANE PROTEIN-RELATED 4 516 IPR007594 GO:0006488|GO:0016021
Ahy13g1229 517 Pfam Rft protein 13 510 IPR007594 GO:0006488|GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy13g1229 Ahy-Chr13 14277091 14285273 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy13g1229 K06316 - gmx:100817452 870.922