Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy13g1203 ATGATGAAGTTTGCAGGGTACTCCTTGGGAGTTTCATTTGCTCCCATAGGCTCAAATGTCTTTGCAAAAAGTTTCAGATTCCCAATAGTTGGTAGCATATATCGTGGGAATTTGCGAAGTTCAAGGTTGTTTTCTGCTTCTTGTTGGAGAGAACAATCAAATGGAAAAAATGGGGTGGTTGCAAAACAGTATCTTCCACCTTGGTTTAGTGTTGCTCCAATGATGGATTGGACGGATAATCACTATAGGACTCTAGCACGCCTCATATCGAAGCATGCTTGGCTCTACACTGAGATGATTGCAGCTGAAACGATTGTTCATCAAAAGGACAACCTGGACAGGTTCTTGGCATATTCTCCAGATCAGCATCCCATTGTGCTTCAAATCGGAGGGTATATAGAAAATTTGGCAAAAGCAACTGAACTTGCTAATGCTTATTGCTATGATGAGATCAATTTAAACTGTGGATGCCCTAGTCCAAGGGTAGCTGGACATGGATGCTTTGGCGTGAGCCTTATGCTTGACCCAAAGTTTGTTGCTGAAGCTATGTCGGCAATTGCTGCCAACACAAATGTACCTGTTAGTGTCAAATGTCGCATTGGAGTGGATGATCATGATTCCTATGATCAGCTATGTGATTTCATTTACAATGTTTCGTCTTTCTCTCCCACTAAGCATTTCATAATTCACTCAAGGAAGGCATTGCTCAATGGCATTAGCCCAGCTGAAAATCGGAATATTCCTCCACTAAAATATGAATATTTTTATGGCCTCTTACGTGATTTTCCTGACTTAACATTTACAATCAATGGTGGCATTTCTGGTATTGATGAGGTCAATGCAGCTCGAGAAGCTGGTGCTCATGGTGTTATGCTTGGACGTGCAGCATACAATAATCCATGGCATATTTTGGGACATGTTGATACTGCAATTTATGGTGCACCACGCAGTGGTCTCACACGTCGTCAGGTACTCAAAAAATATCAAGTCTATGGAGATTCTGTGTTGGGAAAATATGGGCACAAGCCAACTGTGCGAGATATTGTGAAGCCTTTGCTCAATCTTTTCCATTCAGCACCTGGAAATGGACTTTGGAAGCGCAAAGCAGATGCTGCTTTCCGAAGTTGCACGAATTCTTGTGCTATCCAGACAATTGAATCATTTTTTGAAGAAACCCTTGTAGCAATTCCTGACTTGGTATTGGATTCGTCTGCTGTGGAACCACCGCCTGGCCGTGGTGATCTTTTTGCCAACATAGATAGTTTACTGCCTCCTCCTTACAGAACAAGAGAAGAAGAGATCGTTTTATGCGCTTAG 1317 0.4229 MMKFAGYSLGVSFAPIGSNVFAKSFRFPIVGSIYRGNLRSSRLFSASCWREQSNGKNGVVAKQYLPPWFSVAPMMDWTDNHYRTLARLISKHAWLYTEMIAAETIVHQKDNLDRFLAYSPDQHPIVLQIGGYIENLAKATELANAYCYDEINLNCGCPSPRVAGHGCFGVSLMLDPKFVAEAMSAIAANTNVPVSVKCRIGVDDHDSYDQLCDFIYNVSSFSPTKHFIIHSRKALLNGISPAENRNIPPLKYEYFYGLLRDFPDLTFTINGGISGIDEVNAAREAGAHGVMLGRAAYNNPWHILGHVDTAIYGAPRSGLTRRQVLKKYQVYGDSVLGKYGHKPTVRDIVKPLLNLFHSAPGNGLWKRKADAAFRSCTNSCAIQTIESFFEETLVAIPDLVLDSSAVEPPPGRGDLFANIDSLLPPPYRTREEEIVLCA* 439
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy13g1203 438 Pfam Dihydrouridine synthase (Dus) 71 375 IPR035587 -
Ahy13g1203 438 PANTHER TRNA-DIHYDROURIDINE SYNTHASE 60 435 - -
Ahy13g1203 438 CDD DUS_like_FMN 69 301 IPR035587 -
Ahy13g1203 438 SUPERFAMILY FMN-linked oxidoreductases 68 367 - -
Ahy13g1203 438 Gene3D - 313 384 - -
Ahy13g1203 438 PANTHER FMN-LINKED OXIDOREDUCTASES SUPERFAMILY PROTEIN 60 435 IPR004653 GO:0002943|GO:0017150
Ahy13g1203 438 Gene3D Aldolase class I 65 306 IPR013785 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy13g1203 Ahy-Chr13 13853675 13858317 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy13g1203 K05539 - gmx:100779457 714.146