Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy13g1201 ATGGCATTTCACGTAGCTTGCCCAATTACATGTCGTAGAATCTGCTTCTGCGCCTTAGGGTTTCCGCGAGCTCTTCATGGAACTGAAGCTTCCAATGGCTTCCTCAACGACGTTGCCGCGCTCGGCGAATTCCTCTCCGACAATCGAAAGGACACGGCCACCGTCAAGGTTGCAGTTCCCAAGGTCGTACCGCCTCCTCCGCCGCCGAATCCTACGCCGGATGGAGGAGTACCTGCCGCGGAAGAGGAGTCCGCATCGATGAAGGCAAAGCGCGTGGCACTGCAGCGGAAGGGCGCCGCCGCCATGATCGCCGCCGAGGAATACGCTCGCCGGTTGGAGTCCGGTGATGTTGCGGATGCACCTGGAAATCCTGTTGGAGAAGAACCGGGCCAAGCTAATGCCAAAGTCTTTTGTCGAATGTGTAATCGTGTTGAAAACGAAGGAAGCGAGAGAGCAAAGAAGATGCTATCGTGTAAGAGTTGTAACAAGAAGTATCATAGGAACTGCTTGAGAAGTTGGGCACAAAATAGAGATTTGTTTCATTGGAGCTCATGGACCTGCAGGGCTTGCCGAATTTGTGAGGCTTGCAGAAGGACAGGTGATCCAAGTAAGTTCATGTTTTGCAAAAGGTGTGATGGTGCTTACCATTGTTATTGTCTGCAACCTCCTCATAAGAATGTTAGTACTGGGCCATATTTGTGCCCAAAACATACAAGGTGTCACAGTTGTGGATCCAATGTTCCCGGAAATGGACTGAGTGTGAGGTGGTTTCTAGGGTACACCTGCTGTGATGCATGCGGAAGATTGTTTGTGAAAGGCAACTACTGTCCAGTCTGTTTGAAGGTTTACAGAGATTCAGAATCAACACCAATGGTTTGCTGTGATATTTGCCAGCGTTGGGTGCATTGTCACTGTGATAATATTAGTGATGAGAAATATCACCAATTTCAAGTGGATCGGAATTTGCAGTATAAATGTCCTACTTGTCGTGGGGAATGTTATCAGATCAAGGGACTTGAGGATGCAGTTCAAGAGCTTTGGAAGAGAAGAAATATTGCTGATAGAGATTTAATTGCCAGCTTGAGGGCTGCAGCTGGTTTGCCAACTCAGGAAGAAATATTTTCTATTTCACCATTTTCAGATGATGAGGATAGCGAGCCTTTGAAATTAAAGAGTGAATCTGGCCGTTCCTTTAAATTCTCTTTAAAGAATTTATCGAATAACTCACCCAAGAAGTTTAAGGATTATATAAAGAAATCTTCAAACAAAAATTCTAAGAAAAAGGACTCTCAGTCGGTTATGACTAATAAACCAGACATGCACTATAGTTTTGAAGGACAAAGCGATGTAAAATCTTTACATAGCTTGGATGATGATAAGAATGATGATATACAATCCCAAAGAAATGAAGGTCCTGAAGTTTATTCATCCCCTGCTGCTGGAAGCCTGAGCCAAACTGAAGTATCTTGTCCTATCAACAAGACAGGGATTTTGAAACATAAGTTTGTTGATGAGGTGATGGTTAGTGATGAAGAGAGGAAGCCCAGAGTTTTCCGAATCAAAAATAATAAGGCACATATACTGAATAGTGAAGATGAGATTGGAAAAGATGGTGATAAGGCTGAGAGTGTCAAAGGTAAGAAGTTGGTCATTAATTTGGGTGCACGGAAAATTAATGTGGCTAATTCTCCCCGCTCTGATACTTCAAGCTGCCAAAGGGATCAAGATCTGGTTACTGTTAATGGAAGTGAAGATATAAGCCAAGTAAGGAAAGGATTTGCATCAGATAGACATGATGGAGCCGCTAGACGTGTTGATGGAAGCAATGTTGACTCTGGCCAATCAAAACATTTAAAGGTTTCAGGTAGAGAAGAAAATTTCATTAAACTGGGGAAATTGAAGCCAGAAGTTCAGAAATTCACTCTACCATCTGGTAGAGGTGAGGTTCCTTTAGATCAAACTCGCATCTTGCAGGGAAAACGTGGTACTGATGCAAACGTGGAAGCAACACCAAGAGGTGAAAGAACATATCATCGGAGGCCGAAAGAAGGCATTTCTGATGCATATGATGGGACAGATAACAATCATAATCAAACACCTTCACATTCTTTGGCAAAAGATTCTAAACCACTACTCAGATTTAAATTCAAGAAACCTAGTGTAGAAAGTAAAAATTCTATTATTCAAGAGGAAGAAAAGACTACAATCAAGGGCCAGAGGTCAAAAAGGAAGAGACCTTCACCTTTCAAGGAGAAAGCATCATTTAATGAGGCTGGAGATGTAAATCAATCACAGACGGGAAATCTAATGGATGAAATCATGGATGCTAACTGGATATTGATGAAGTTGGGCAATGATGCAATTGGTAAAAGAGTTGAAGTTCATCACACATCGGACAATTCTTGGCATAAGGGAGAGGTTACTGATATAGTTGAAGGCTCATCGAAATTGTACGTTACCTTAGATGATGGGAAGATCAAGACCGTGGAACTCAGGAAGCAGGGAGTTCGCTTTGTTTCTCAAAAGCAGAAAAGGTCAAAGACATGA 2547 0.4283 MAFHVACPITCRRICFCALGFPRALHGTEASNGFLNDVAALGEFLSDNRKDTATVKVAVPKVVPPPPPPNPTPDGGVPAAEEESASMKAKRVALQRKGAAAMIAAEEYARRLESGDVADAPGNPVGEEPGQANAKVFCRMCNRVENEGSERAKKMLSCKSCNKKYHRNCLRSWAQNRDLFHWSSWTCRACRICEACRRTGDPSKFMFCKRCDGAYHCYCLQPPHKNVSTGPYLCPKHTRCHSCGSNVPGNGLSVRWFLGYTCCDACGRLFVKGNYCPVCLKVYRDSESTPMVCCDICQRWVHCHCDNISDEKYHQFQVDRNLQYKCPTCRGECYQIKGLEDAVQELWKRRNIADRDLIASLRAAAGLPTQEEIFSISPFSDDEDSEPLKLKSESGRSFKFSLKNLSNNSPKKFKDYIKKSSNKNSKKKDSQSVMTNKPDMHYSFEGQSDVKSLHSLDDDKNDDIQSQRNEGPEVYSSPAAGSLSQTEVSCPINKTGILKHKFVDEVMVSDEERKPRVFRIKNNKAHILNSEDEIGKDGDKAESVKGKKLVINLGARKINVANSPRSDTSSCQRDQDLVTVNGSEDISQVRKGFASDRHDGAARRVDGSNVDSGQSKHLKVSGREENFIKLGKLKPEVQKFTLPSGRGEVPLDQTRILQGKRGTDANVEATPRGERTYHRRPKEGISDAYDGTDNNHNQTPSHSLAKDSKPLLRFKFKKPSVESKNSIIQEEEKTTIKGQRSKRKRPSPFKEKASFNEAGDVNQSQTGNLMDEIMDANWILMKLGNDAIGKRVEVHHTSDNSWHKGEVTDIVEGSSKLYVTLDDGKIKTVELRKQGVRFVSQKQKRSKT* 849
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy13g1201 848 MobiDBLite consensus disorder prediction 662 707 - -
Ahy13g1201 848 MobiDBLite consensus disorder prediction 61 75 - -
Ahy13g1201 848 MobiDBLite consensus disorder prediction 412 434 - -
Ahy13g1201 848 ProSiteProfiles Zinc finger PHD-type profile. 273 332 IPR019787 -
Ahy13g1201 848 ProSiteProfiles Zinc finger PHD-type profile. 135 193 IPR019787 -
Ahy13g1201 848 CDD PHD_SF 137 190 - -
Ahy13g1201 848 MobiDBLite consensus disorder prediction 595 615 - -
Ahy13g1201 848 MobiDBLite consensus disorder prediction 411 487 - -
Ahy13g1201 848 MobiDBLite consensus disorder prediction 690 705 - -
Ahy13g1201 848 MobiDBLite consensus disorder prediction 667 689 - -
Ahy13g1201 848 MobiDBLite consensus disorder prediction 722 763 - -
Ahy13g1201 848 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 270 332 IPR013083 -
Ahy13g1201 848 SUPERFAMILY FYVE/PHD zinc finger 129 191 IPR011011 -
Ahy13g1201 848 SMART PHD_3 192 238 IPR001965 -
Ahy13g1201 848 SMART PHD_3 137 191 IPR001965 -
Ahy13g1201 848 SMART PHD_3 275 330 IPR001965 -
Ahy13g1201 848 MobiDBLite consensus disorder prediction 61 84 - -
Ahy13g1201 848 SUPERFAMILY FYVE/PHD zinc finger 182 243 IPR011011 -
Ahy13g1201 848 MobiDBLite consensus disorder prediction 468 487 - -
Ahy13g1201 848 MobiDBLite consensus disorder prediction 451 467 - -
Ahy13g1201 848 SUPERFAMILY FYVE/PHD zinc finger 274 330 IPR011011 -
Ahy13g1201 848 ProSitePatterns Zinc finger PHD-type signature. 138 190 IPR019786 -
Ahy13g1201 848 MobiDBLite consensus disorder prediction 722 738 - -
Ahy13g1201 848 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 130 247 IPR013083 -
Ahy13g1201 848 PANTHER HISTONE ACETYLTRANSFERASE 2 842 - -
Ahy13g1201 848 PANTHER PHD FINGER FAMILY PROTEIN 2 842 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy13g1201 Ahy-Chr13 13806528 13813237 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy13g1201 - - gmx:100815407 1267.29