Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy13g1096 ATGAATAACATGAGGGTTCCAAATGTTCCTGGTGGAGGGCTTTCTGCTCTGCTCAAAGTTAGCATCTTTGGTGGTCTTGCTGTGTATGGAGCTGCAAACAGCTTGTACAATGTTGAGGGAGGGCACCGAGCTATCGTCTTCAATCGCATTGTTGGTGTCAAAGATAAGGTCTATCCTGAAGGAACACATTTTATGATTCCTTGGTTCGAGAGGCCTGTGATCTATGATGTCCGTGCACGACCTCATTTAGTGGAGAGTACATCAGGAAGTCGTGATCTCCAAATGGTGAGAATTGGACTTAGGGTCCTTACCCGTCCTCTACCAAGTCATTTACCAACAATTTACCGAACCCTGGGTGAGAATTATAACGAGAGGGTCTTGCCTTCTATTATACATGAAACTCTGAAAGCTGTGGTTGCACAGTACAATGCCAGTCAGCTCATTACTCAGAGAGAGAATGTCAGTAGAGAAATAAGGAAGATCTTGACTGAAAGGGCCTCCCATTTCAATATTGCATTGGATGATGTGTCAATCACAAGCTTGACATTCGGTAAGGAATTTACAGCTGCAATTGAAGCTAAGCAGGTTGCTGCTCAAGAAGCTGAGAGGGCTAAGTTTGTGGTAGAAAAAGCTGAACAGGACAAAAGAAGTGCTGTTATTAGAGCACAGGGAGAAGCCAAGAGTGCACAATTGATTGGTCAAGCTATTGCCAATAATCCTGCATTTATCACCTTGAGGAAAATTGAAGCTGCAAGGGAAATCGCTCATACAATTTCAAATGCTGCTAACAAGGTTTACTTGAATTCAGATGACCTCTTGCTGAATCTTCAAGAGATGAATTTGGAGCCAGCGGGGAAGAGATAG 864 0.4352 MNNMRVPNVPGGGLSALLKVSIFGGLAVYGAANSLYNVEGGHRAIVFNRIVGVKDKVYPEGTHFMIPWFERPVIYDVRARPHLVESTSGSRDLQMVRIGLRVLTRPLPSHLPTIYRTLGENYNERVLPSIIHETLKAVVAQYNASQLITQRENVSREIRKILTERASHFNIALDDVSITSLTFGKEFTAAIEAKQVAAQEAERAKFVVEKAEQDKRSAVIRAQGEAKSAQLIGQAIANNPAFITLRKIEAAREIAHTISNAANKVYLNSDDLLLNLQEMNLEPAGKR* 288
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy13g1096 287 CDD SPFH_prohibitin 35 229 IPR000163 GO:0016020
Ahy13g1096 287 PANTHER PROHIBITIN 2 285 IPR000163 GO:0016020
Ahy13g1096 287 Coils Coil 194 214 - -
Ahy13g1096 287 Gene3D Band 7 domain 65 197 IPR036013 -
Ahy13g1096 287 PANTHER PROHIBITIN-1, MITOCHONDRIAL-LIKE 2 285 - -
Ahy13g1096 287 SUPERFAMILY Band 7/SPFH domain 66 202 IPR036013 -
Ahy13g1096 287 Pfam SPFH domain / Band 7 family 37 212 IPR001107 -
Ahy13g1096 287 PRINTS Prohibitin signature 165 184 IPR000163 GO:0016020
Ahy13g1096 287 PRINTS Prohibitin signature 119 137 IPR000163 GO:0016020
Ahy13g1096 287 PRINTS Prohibitin signature 213 229 IPR000163 GO:0016020
Ahy13g1096 287 PRINTS Prohibitin signature 96 115 IPR000163 GO:0016020
Ahy13g1096 287 PRINTS Prohibitin signature 190 213 IPR000163 GO:0016020
Ahy13g1096 287 PRINTS Prohibitin signature 78 94 IPR000163 GO:0016020
Ahy13g1096 287 PRINTS Prohibitin signature 142 158 IPR000163 GO:0016020
Ahy13g1096 287 SMART PHB_4 34 195 IPR001107 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy13g1096 Ahy-Chr13 12371527 12374484 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy13g1096 K17081 - gmx:100811958 520.776