Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy13g1078 ATGAGTGAGAACTTAATGGAAAAAGTGAACGCATTAGGAGAGCGTCTCAAGATTGGTGGGGTGGAAGTAGGTCGAAAGATGAGTGCCGGAATGAGTTCTATGAGCTTCAAAGTAAAGGAATTTTTCCATGGTCAAAACCATGCAGACAGGCTCGTCGAGGAGGCTACATCAGAGTCCCTCGACGAGCCTGACTGGTCTATGAACCTTCAAATCTATGACTTGATCAATGATCATGAAAGCATCAACGCAGGCGAAGTGGTTCGGGCGATCAAGAGGAGGATCATGATGAGGAATAATCCGAGGATTCAGTACCTTGCATTGGTCCTTCTTGAAGCATTGCTTAAGAATTGTGACAATAAGGGATTCATGGAAGTGGCATCTGAGAGAGTTCTTGATGAGATGGTTAAACTAATTGATGATCCTTTAACAGTTTCTAGTAACCGCAACAAGGCTTTGATCATGATTGAGGCTTGGGGAGAATCAACCACTCAGCTTCGTTATTTGCCTATTTTTGAAGAAACTTACAAGAGTTTGAAATCAAGGGGTGTTGGATTTCCTGTGAGAGACAATGAAAGCTTGGCTCCAATTTTCACTCCTCCTCCTCGTCGTTCATCCTCTGCTGCTGATTCAGATGATATCATTTTACCACATCCCATTCGCTATGATATTCCCATGCGAAGCTTCACCTCTCAACCAACAACAAAGGAAGCTTTTCATGTTGCAAGAAACACCATTGAGCTTCTCTATACTGTCTTATCTTCTTCACCACACCAGCAACTTTTACGGGATGAACTGACAACCTCATTAGTACAACAGTGTCAAAGGTCTCAATGTGATGTGCAAAGAATAGCTGAGACTTCTGGAGACAATGAAGCACTTCTTTTTGAGGCATTGAATGTGAATGATGAGATTCAAAAGGTTCTAACCAAGTATCAAGAATTCAACAAGCCTACAGCTCCTCCTGCTCTGCCTACATTTACTCCACTCCAACCGGTTGAGGCGGAGGAATCACCCGGCCGGAACACAACTGAAGATGATGATGATGATGATGCCTTGATTAGGAAGCCAAGTGATTCAAGGGTTGGATTGAGCCATGATGACATGATGCATGATCTTGATGAGATGATTTTTGGCAAAAGAGGTGTTGGAGATGATCCTACCAACCAACACCAATCATCAAAGCATGATCTCATCTCCTTCTAA 1203 0.4306 MSENLMEKVNALGERLKIGGVEVGRKMSAGMSSMSFKVKEFFHGQNHADRLVEEATSESLDEPDWSMNLQIYDLINDHESINAGEVVRAIKRRIMMRNNPRIQYLALVLLEALLKNCDNKGFMEVASERVLDEMVKLIDDPLTVSSNRNKALIMIEAWGESTTQLRYLPIFEETYKSLKSRGVGFPVRDNESLAPIFTPPPRRSSSAADSDDIILPHPIRYDIPMRSFTSQPTTKEAFHVARNTIELLYTVLSSSPHQQLLRDELTTSLVQQCQRSQCDVQRIAETSGDNEALLFEALNVNDEIQKVLTKYQEFNKPTAPPALPTFTPLQPVEAEESPGRNTTEDDDDDDALIRKPSDSRVGLSHDDMMHDLDEMIFGKRGVGDDPTNQHQSSKHDLISF* 401
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy13g1078 400 Gene3D - 228 317 IPR038425 -
Ahy13g1078 400 PANTHER TOM1-LIKE PROTEIN 1 1 400 IPR044836 GO:0035091|GO:0043130|GO:0043328
Ahy13g1078 400 Gene3D - 41 205 IPR008942 -
Ahy13g1078 400 Pfam GAT domain 242 315 IPR004152 GO:0035091|GO:0043130
Ahy13g1078 400 ProSiteProfiles VHS domain profile. 55 186 IPR002014 GO:0035091|GO:0043130
Ahy13g1078 400 Pfam VHS domain 47 182 IPR002014 GO:0035091|GO:0043130
Ahy13g1078 400 MobiDBLite consensus disorder prediction 347 380 - -
Ahy13g1078 400 SMART VHS_2 48 182 IPR002014 GO:0035091|GO:0043130
Ahy13g1078 400 MobiDBLite consensus disorder prediction 318 400 - -
Ahy13g1078 400 MobiDBLite consensus disorder prediction 385 400 - -
Ahy13g1078 400 CDD VHS 48 180 - -
Ahy13g1078 400 PANTHER TOM1-LIKE PROTEIN 1 1 400 - -
Ahy13g1078 400 ProSiteProfiles GAT domain profile. 229 316 IPR004152 GO:0035091|GO:0043130
Ahy13g1078 400 SUPERFAMILY GAT-like domain 185 316 - -
Ahy13g1078 400 SUPERFAMILY ENTH/VHS domain 43 186 IPR008942 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy13g1078 Ahy-Chr13 12193838 12196469 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy13g1078 - - zju:107414831 456.832