Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy13g1068 ATGGCGTCAAAACAATTTAAGGGTAGCAGATCATCTCTATCAGCAACTTCTGATGCACCTGAAAACCAGAAGCCTCCTTTACCTCCAACCATAACATTCGGCCGAAGAACTTCGTCGGGTCGCTACATCAGTTACTCTAGAGATGATCTTGACAGTGAGCTAGGAAGCAATGACTTCATGAATTACACAGTGCATTTGCCACCAACCCCAGATAACCAACCTATGGATCCATCAATCTCACAGAAAGTTGAGGAACAATATGTGTCGAATTCACTCTTCACAGGCGGATTCAACAGTGTGACACAAGCACATCTTATGGACAAGGTGATAGAGTCCGAAGCAAACCATCCACAGATGGCTGGTGCAAAAGGATCTTCATGTGCAATACCTGGTTGTGATGCTAAGGTGATGAGGGATGAACGCGGTGTGGATATTCTTCCATGTGAGTGTGATTTCAAGATATGTAGAGACTGCTACATAGATGCAGTGAAAATAGGTGGTGGTATATGTCCAGGGTGCAAGGAACCATACAAGAACACAGAGCTAGATGAAGTGGCAGTGGATAATGGAAGGCCTCTTCCACTTCCACCGCCGAACCGGGTGTCTAAGATGGAGAGGAGATTGTCATTGATGAAGTCAACAAAGTCAGCTCTGATGAGAAGCCAAACTGGTGATTTTGATCACAACAGGTGGCTCTTTGAGACAACAGGTACCTATGGCTATGGCAATGCTATATGGCCAAAGGAAGGGAATTTCGGAAATGGAAATGGAGATGACAATAGTGTTGCTGATCCTTCTGAGTTGATGAACAGACCTTGGAGACCACTTACAAGGAAACTCAAGATACCTGCTGCTATTCTGAGTCCATATCGTCTCATCATTTTTGTAAGATTGGCAGTGTTAGTACTATTCTTGATGTGGAGGGTGACACACCCAAATAAAGAGGCAATCTGGCTATGGGGAATGTCTGTGGTTTGTGAGATATGGTTTGCATTCTCTTGGCTCCTTGATCAATTGCCAAAGCTATGTCCAGTGAATCGTTCCACCGATCTTAATGTTCTTAAGGAAAAATTTGAAACACCAACTCCTGACAATCCTACTGGAAAATCTGATCTTCCAGGCATAGATATTTTTGTCTCTACTGCAGATCCTGAAAAAGAACCACCTCTTGTAACTGCAAACACCATCTTGTCTATTCTAGCTACTGATTACCCTGTTGAGAAGCTTTCTTGCTATGTTTCCGACGATGGTGGAGCTCTTCTAACTTTCGAGGCAATGGCTGAAGCTGCTAGCTTTGCTAATGTATGGGTTCCTTTCTGCCGGAAACATGACATTGAGCCGAGAAATCCTGAATCATATTTCAACTTGAAGAGAGACCCTTACAAGAACAAAGTCAGGCCGGATTTCGTGAAGGACCGTAGGCGTGTGAAGCGCGAGTATGATGAGTTCAAAGTTAGGATCAATGGCCTGCCTGACTCAATTCGTCGCCGGTCCGATGCATTTCATGCAAGGGAAGAAATCAAGGCCATGAAACTTCAGAGACAGAACAGGGAAGATGAACCTGTGGAGCCTGTAAAGATTCCAAAAGCAACATGGATGGCTGATGGAACTCACTGGCCAGGAACTTGGTTGAATTCTGCACCTGAACACTCCAGGGGTGACCATGCTGGTATAATTCAGATGATGTTGAAACCTCCAAGTGATGAACCTCTTCTAGGAACCAGTGATGATTCAAATCTCATTGACATGACCGACGTGGATATCCGTCTTCCCCTTCTTGTTTACGTTTCCAGAGAGAAACGTCCGGGCTATGATCACAACAAGAAAGCTGGAGCCATGAACGCCTTGGTTCGAGCCTCGGCAATCATGTCCAATGGACCTTTCATACTCAACCTTGACTGTGATCACTATGTCTATAACTCAAAGGCCATGAGGGAAGGTATGTGCTTCATGATGGATCGAGGAGGCGACCGCCTTTGCTACGTCCAGTTCCCACAACGGTTCGAGGGGATTGACCCCTCAGATAGATATGCGAATCACAATACTGTATTCTTTGATGTCAACATGAGAGCCCTTGATGGACTTCAAGGGCCAGTTTATGTAGGAACCGGTTGTCTATTCAGAAGGGTAGCCCTCTATGGTTTCGATCCACCTCGCTCCAAAGAACATAACTTGGGTTCAGGCTGCTGTAGTTGCTGCCTCGGCCGGAGGCAAAAGAAGAGCACCCCTGAAGAGAACAGAGCACTAAGAATGGGTGATTCTGATCATGAAGAAGAAATGAACCTTTCCTTGTTCCCAAAGAAATTTGGAAACTCAACTTTCCTCATTGATTCAATTCCAGTGGCAGAGTTCCAAGGCAGGCCACTTGCTGACCACCCTGCAGTCAAGAATGGCCGTCCTCCGGGTGCTCTCACTGTCCCCCGGGAGCTTCTCGACGCATCGACCGTCGCCGAGGCCATCAGTGTTATCTCCTGCTGGTATGAGGAGAAGACTGAATGGGGACACCGTGTAGGGTGGATCTACGGATCAGTGACTGAGGATGTTGTCACCGGCTATAGGATGCACAACAGAGGCTGGAAATCCGTTTACTGTGTGACGAAACGCGACGCATTCCGGGGAACTGCTCCGATCAACCTCACGGACAGACTCCATCAGGTTCTCCGGTGGGCTACTGGTTCAGTGGAAATATTCTTCTCAAGAAACAACGCCATTCTTGCAAGCTCAAGAATGAAGCTTCTTCAGCGAATTGCATACCTTAACGTCGGAATCTATCCCTTCACTTCCATATTCCTTATTGTCTACTGCTTTCTTCCGGCACTCTCCCTCTTCTCCGGCCAGTTCATCGTTCAAACCCTCAGCGTCACCTTCCTCGTTTATCTCTTAACAATCACGGTCACTTTATGCATGCTTGCAATTCTGGAGATCAAGTGGTCCGGCATTGAGCTAGAAGAATGGTGGCGAAACGAACAGTTCTGGCTAATCGGCGGAACAAGCGCCCACCTGGCGGCGGTTCTACAAGGCCTGCTAAAAGTGATAGCAGGAATAGAGATCTCATTCACATTAACCTCCAAGTCCGGCGGCGACGACGTAGACGACGAGTTTGCCGATCTATACATTGTGAAATGGACATCACTTATGTTGCCACCAATCACAATAATGATGGTGAACTTGATAGCAATAGCGGTTGGTGTAAGCAGGACTATTTACAGTGCGATACCTCAATGGAGCAAGTTGCTAGGTGGAGTTTTCTTCAGCTTTTGGGTGTTGACTCATTTATACCCTTTTGCAAAAGGGTTGATGGGAAGAAGAGGGAGAACACCTACCATTGTTTTTGTGTGGTCTGGTCTTATTGCTATCACAATTTCACTCCTTTGGGTCGCTATTAATCCACCTCAAGGTTCCAACCAAATTGGTGGTTCCTTTCAGTTCCCATAG 3435 0.4646 MASKQFKGSRSSLSATSDAPENQKPPLPPTITFGRRTSSGRYISYSRDDLDSELGSNDFMNYTVHLPPTPDNQPMDPSISQKVEEQYVSNSLFTGGFNSVTQAHLMDKVIESEANHPQMAGAKGSSCAIPGCDAKVMRDERGVDILPCECDFKICRDCYIDAVKIGGGICPGCKEPYKNTELDEVAVDNGRPLPLPPPNRVSKMERRLSLMKSTKSALMRSQTGDFDHNRWLFETTGTYGYGNAIWPKEGNFGNGNGDDNSVADPSELMNRPWRPLTRKLKIPAAILSPYRLIIFVRLAVLVLFLMWRVTHPNKEAIWLWGMSVVCEIWFAFSWLLDQLPKLCPVNRSTDLNVLKEKFETPTPDNPTGKSDLPGIDIFVSTADPEKEPPLVTANTILSILATDYPVEKLSCYVSDDGGALLTFEAMAEAASFANVWVPFCRKHDIEPRNPESYFNLKRDPYKNKVRPDFVKDRRRVKREYDEFKVRINGLPDSIRRRSDAFHAREEIKAMKLQRQNREDEPVEPVKIPKATWMADGTHWPGTWLNSAPEHSRGDHAGIIQMMLKPPSDEPLLGTSDDSNLIDMTDVDIRLPLLVYVSREKRPGYDHNKKAGAMNALVRASAIMSNGPFILNLDCDHYVYNSKAMREGMCFMMDRGGDRLCYVQFPQRFEGIDPSDRYANHNTVFFDVNMRALDGLQGPVYVGTGCLFRRVALYGFDPPRSKEHNLGSGCCSCCLGRRQKKSTPEENRALRMGDSDHEEEMNLSLFPKKFGNSTFLIDSIPVAEFQGRPLADHPAVKNGRPPGALTVPRELLDASTVAEAISVISCWYEEKTEWGHRVGWIYGSVTEDVVTGYRMHNRGWKSVYCVTKRDAFRGTAPINLTDRLHQVLRWATGSVEIFFSRNNAILASSRMKLLQRIAYLNVGIYPFTSIFLIVYCFLPALSLFSGQFIVQTLSVTFLVYLLTITVTLCMLAILEIKWSGIELEEWWRNEQFWLIGGTSAHLAAVLQGLLKVIAGIEISFTLTSKSGGDDVDDEFADLYIVKWTSLMLPPITIMMVNLIAIAVGVSRTIYSAIPQWSKLLGGVFFSFWVLTHLYPFAKGLMGRRGRTPTIVFVWSGLIAITISLLWVAINPPQGSNQIGGSFQFP* 1145
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy13g1068 1144 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 110 191 IPR013083 -
Ahy13g1068 1144 SUPERFAMILY RING/U-box 112 181 - -
Ahy13g1068 1144 Pfam RING/Ubox like zinc-binding domain 129 178 - -
Ahy13g1068 1144 PANTHER X-BOX TRANSCRIPTION FACTOR-RELATED 34 1142 - -
Ahy13g1068 1144 MobiDBLite consensus disorder prediction 1 21 - -
Ahy13g1068 1144 MobiDBLite consensus disorder prediction 1 38 - -
Ahy13g1068 1144 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 581 716 IPR029044 -
Ahy13g1068 1144 Pfam Cellulose synthase 375 1133 IPR005150 GO:0016020|GO:0016760|GO:0030244
Ahy13g1068 1144 PANTHER CELLULOSE SYNTHASE-LIKE PROTEIN D3 34 1142 - -
Ahy13g1068 1144 SUPERFAMILY Nucleotide-diphospho-sugar transferases 390 938 IPR029044 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy13g1068 Ahy-Chr13 12017019 12022036 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy13g1068 2 1144 Glycosyltransferase AT3G03050 83.885 0.0 2030
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy13g1068 K20924 - gmx:100792604 2153.25
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy13g1068 13 12017019 12022036 Ahy15g1185 15 18745836 18751139 ECH
Ahy13g1068 13 12017019 12022036 Ahy13g1068 13 12017019 12022036 ECH