Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy13g1039 ATGAGCAACAGCATCGCTGGAATTGGAACTGGAAATGGAAATGGGAAAGTGGTGTGCGTTACCGGCGCTTCTGGTTACATAGCGTCATGGATAGTCAACCTCCTCCTTCAACGTGGCTACACTGTTAGGGCCACCCTTCGTGATCCAAGTAATCCAAAGAAGCTTGATCACTTGCTCAAACTCCACGGCGCAAAGGAGAGGTTGCAGATCTTTAAGGCGGACCTTCTAGAAGATGGCTCCTTTGACTCTGCCATTGACGGTTGCGATGGTGTCTTTCATACTGCTTCGCCTGTTACGCTTCGGGTTGTCAATGACCCGCAGGCTGAATTAATTGATCCAGCAGTGAAAGGAACCTTGAATGTCCTTCAATCCTGTGCAAAATCACCATCGGTGAAACGAGTAGTATTGACATCTTCTATTTCTGCGGTTCTATTTACAGATAGGCCTTTAACTCCCGATGTAGTGGTCGATGAGACATGGTTTTCAGATGCTGATAACTGTACAAAACTAGAGAGATGGTATTCACTTTCAAAGACTTTAGCAGAGGATGCAGCCTGGAAATTTGCAAACAAGAACGGCATTGACATGGTTTCTATTTTACCATCAATGGTAGCAGGACCTCTGTTACAACCAGAAGTTAATGAAAGCGTTGAGCCAATCCTAAGCATAATAAATGGTGCACCATTTCCAAATAGAGTTTTTGGATGGGTGAACGTGAAAGATGTCGCGATCGCCCATATTCAGGCATATGAGATTCCTACAGCTAGTGGAAGATATCTTATTGTTGAGAGAGTGGTGCACTACTCTGAACATGCTAGGATTTTGCATGATCTTTACCCAACATTACAGATTAAGGATAAGTGCGAAGACGATAAGCCATTTGTGCCAACATATCAGGTTTCCAAAGAAAAGGCAGAGAGTTTGGGAATCGAATTCACACCATTGGAAGTAACCCTCAAAGAGACTGTTGAAAGCTTTAGAGAAAAGAACATTGTCAACTTTTAA 1005 0.4338 MSNSIAGIGTGNGNGKVVCVTGASGYIASWIVNLLLQRGYTVRATLRDPSNPKKLDHLLKLHGAKERLQIFKADLLEDGSFDSAIDGCDGVFHTASPVTLRVVNDPQAELIDPAVKGTLNVLQSCAKSPSVKRVVLTSSISAVLFTDRPLTPDVVVDETWFSDADNCTKLERWYSLSKTLAEDAAWKFANKNGIDMVSILPSMVAGPLLQPEVNESVEPILSIINGAPFPNRVFGWVNVKDVAIAHIQAYEIPTASGRYLIVERVVHYSEHARILHDLYPTLQIKDKCEDDKPFVPTYQVSKEKAESLGIEFTPLEVTLKETVESFREKNIVNF* 335
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy13g1039 334 Pfam NAD dependent epimerase/dehydratase family 18 250 IPR001509 -
Ahy13g1039 334 CDD FR_SDR_e 18 309 - -
Ahy13g1039 334 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 14 328 IPR036291 -
Ahy13g1039 334 PANTHER NAD DEPENDENT EPIMERASE/DEHYDRATASE 11 332 - -
Ahy13g1039 334 Gene3D - 16 334 - -
Ahy13g1039 334 PANTHER CINNAMYL ALCOHOL DEHYDROGENASE 11 332 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy13g1039 Ahy-Chr13 11586324 11589335 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy13g1039 12 334 Miscellaneous Gene Families AT5G19440 66.667 3.26e-160 449
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy13g1039 - - gmx:100799213 509.22