Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy13g1005 ATGATGAACAGGCTCTTCCGATCCACCACACTCACAGCGCAGGTTTCCAGAAGTTTGCATGAAAATCTTCTTAAGATTGCCTTATGGTCTCGATCAAACAGTACAAGCTCTTCTTTGGCAACAGACAACACCACTAATGATGCACGGTTCAAGGGCCATGATATGCTTGCGCCTTTCACAGCTGGGTGGCAGACAACTGATGTGAATCCTTTGGTTATAGACAAGTCAGAGGGAAGCTATGTATATGACATTAATGGGAAGAAGTATCTTGACTCACTTGCTGGTCTATGGTGCACAGCTCTAGGGGGGAATGAGCCACGTCTAGTTGAAGCTGCCACTGCACAACTGAACAAATTGCCATTTTACCATTCCTTTTGGAATCGGACTACAAAACCCTCTCTGGATCTAGCCAAGGACCTCCTAGAAACGTTCACAGCCAGAAAGATGGCTAAAGCTTTTTTTGTTAATAGTGGATCAGAAGCAAATGACACTCAGGTGAAACTTGTATGGTATTATAACAACGCACTTGGAAGACCAAATAAAAAGAAATTCATAGCTCGTGCTAAATCGTATCATGGTTCAACATTGATAGCAGCCAGTCTTTCTGGACTTCCAGCTCTGCATCAAAAATTTGATCTGCCTGCTCCTTTTGTCTTACACACTGATTGTCCACATTACTGGCGGTTTCATCTTCCAGGTGAGACAGAGGAAGAGTTTTCAACCAGATTAGCCAAAAATCTAGAGGAGCTAATTCTGAAAGAGGGACCAGATACAATTGCTGCATTTATTGCTGAGCCAGTTATGGGGGCAGGAGGTGTAATACCTCCACCTGCAACTTATTTCGAAAAGATCCAAGCTGTTGTCAAGAAGTATGACATTCTTTTTATTGCTGATGAGGTGATCTGTGCCTTTGGAAGACTTGGAACAATGTATGGATGTGACAAGTATGGCATCAAGCCCGATCTTGTCTCCTTAGCAAAGGCACTCTCGTCTGCATATTTGCCAATTGGAGCAGTTCTTGTGAGTCCAGAAGTTTCAGAAGTTATACACTCACAGAGCAACAAGCTTGGTTCATTTTCCCATGGGTTTACTTACTCTGGACACCCTGTATCCTGTGCTGTTGCAATTGAAGCACTGAAGATCTACAAAGAAAGAAATATTGTCGAGAAGGTGGCAAATATCTCCCCAAGGTTCCAAGATGGTGTAAAAGCTTTTGCTGACAGTCCTATCGTTGGAGAGATCCGAGGAACTGGCTTAATTTTGGGTACCGAGTTCACAGACAACAAGTCACCTAATGATCCATTTCCTCCTGAATGGGGGATTGGTGCCTATTTTGGAGCACAATGTGAGAAGCATGGTATGTTAGTTCGTGTAGCTGGGGATAACATTATGATGTCTCCACCGTTCATCATTTCTCCTGAAGAAGTTGATGAGTTAATAAGCATTTATGGGAAAGCCCTAAAAGGTACGGAAGAGAGGGTGAAAGAGCTCAAGTCTCAGCGGAAGTAG 1509 0.4341 MMNRLFRSTTLTAQVSRSLHENLLKIALWSRSNSTSSSLATDNTTNDARFKGHDMLAPFTAGWQTTDVNPLVIDKSEGSYVYDINGKKYLDSLAGLWCTALGGNEPRLVEAATAQLNKLPFYHSFWNRTTKPSLDLAKDLLETFTARKMAKAFFVNSGSEANDTQVKLVWYYNNALGRPNKKKFIARAKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRFHLPGETEEEFSTRLAKNLEELILKEGPDTIAAFIAEPVMGAGGVIPPPATYFEKIQAVVKKYDILFIADEVICAFGRLGTMYGCDKYGIKPDLVSLAKALSSAYLPIGAVLVSPEVSEVIHSQSNKLGSFSHGFTYSGHPVSCAVAIEALKIYKERNIVEKVANISPRFQDGVKAFADSPIVGEIRGTGLILGTEFTDNKSPNDPFPPEWGIGAYFGAQCEKHGMLVRVAGDNIMMSPPFIISPEEVDELISIYGKALKGTEERVKELKSQRK* 503
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy13g1005 502 Gene3D Aspartate Aminotransferase, domain 1 71 487 IPR015422 GO:0003824
Ahy13g1005 502 Pfam Aminotransferase class-III 69 486 IPR005814 GO:0008483|GO:0030170
Ahy13g1005 502 PANTHER GAMMA AMINOBUTYRATE TRANSAMINASE 1, MITOCHONDRIAL 18 497 - -
Ahy13g1005 502 ProSitePatterns Aminotransferases class-III pyridoxal-phosphate attachment site. 295 332 IPR005814 GO:0008483|GO:0030170
Ahy13g1005 502 PANTHER ADENOSYLMETHIONINE-8-AMINO-7-OXONONANOATE AMINOTRANSFERASE 18 497 - -
Ahy13g1005 502 CDD OAT_like 70 487 IPR005814 GO:0008483|GO:0030170
Ahy13g1005 502 Gene3D - 105 387 IPR015421 GO:0003824
Ahy13g1005 502 SUPERFAMILY PLP-dependent transferases 56 488 IPR015424 -
Ahy13g1005 502 Coils Coil 487 502 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy13g1005 Ahy-Chr13 11075177 11082490 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy13g1005 K16871 - pvy:116112175 879.011