Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy13g0968 ATGGGAGATGAAGGTATCATGAGAGGTGTCACAAAGCAAGTCAACCCTGGGAAGGCTTCCATATTAGCTCTTGGCAAGGCATTCCCACACCAACTTGTCATGCAAGAATACTTGGTTGATGGATATTTTAGGGACACTAACTGTGACAATCTTGAGCTCAAACAGAAGCTAAGCAGACTTTGCAAGACAACAACAGTGAAAACAAGGTATGTGGTCATGTCTGAGGAGATACTAAGGAAGTACCCAGAACTTGCGCTTGAAGGCCTTCCAACGGTGAAGCAAAGGCTAGAGATATGTAACAAGGCAGTGACACAAATGGCAATTGAAGCCTCCCAGGTTTGCATCAAGAACTGGGGTAGATCCTTATCTGACATAACACACTTGGTTTATGTCTCATCAAGTGAAGCTAGACTACCAGGTGGTGACCTTTATCTAGCCAGAGGACTAGGACTCAGCCCTGCGACTCAACGAGTCTTGCTCTATTTCGTGGGGTGCTCAGGGGGTGTGGCCGGCCTACGTGTTGCAAAAGACATAGCCGAGAACAACCCTGGTAGCAGAGTGCTTCTAGCTACTTCTGAGACTACAATCATTGGGTTCAAACCACCAAGTGCAGATAGACCCTATGATCTTGTTGGGGTGGCTCTCTTTGGTGATGGCGCTGGTGCAATGATAATTGGCTCAGACCCAATAGAGGGTACTGAGAAGCCTCTCTTTGAGCTTAACACAGCAATTCAAGAGTTTCTGCCAGACACTGAGAAGAAAATTGATGGAAGATTGACTGAGGAGGGGATAAGCTTCAAGTTAGCAAGAGAACTTCCTCAAATAATTGAGGACAATGTGGAAGATTTCTGTGACAAGTTAATGAGTGTTGCTGGATTCCAGAACAAGGAGTATAATAAGCTGTTCTGGGCAGTGCATCCAGGTGGCCCTGCAATCTTGAACCGCATAGAGAAGAGGCTCGACTTGCTGCCAGAGAAGTTGAATGCAAGTAGAAAGGCTTTGATGGATTATGGAAATGCTAGCAGCAACACCATTGTGTATGTGCTGGAATACATGCTAGAAGAGGCCATTAAGATTAGAAAGGATGGTGGAGATGATCCTGAATGGGGCATGTTGCTTGCTTTTGGACCTGGGATCACTTTTGAAGGGATTCTAGCAAGGAACCTGTGTAATTAA 1176 0.4566 MGDEGIMRGVTKQVNPGKASILALGKAFPHQLVMQEYLVDGYFRDTNCDNLELKQKLSRLCKTTTVKTRYVVMSEEILRKYPELALEGLPTVKQRLEICNKAVTQMAIEASQVCIKNWGRSLSDITHLVYVSSSEARLPGGDLYLARGLGLSPATQRVLLYFVGCSGGVAGLRVAKDIAENNPGSRVLLATSETTIIGFKPPSADRPYDLVGVALFGDGAGAMIIGSDPIEGTEKPLFELNTAIQEFLPDTEKKIDGRLTEEGISFKLARELPQIIEDNVEDFCDKLMSVAGFQNKEYNKLFWAVHPGGPAILNRIEKRLDLLPEKLNASRKALMDYGNASSNTIVYVLEYMLEEAIKIRKDGGDDPEWGMLLAFGPGITFEGILARNLCN* 392
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy13g0968 391 SUPERFAMILY Thiolase-like 216 387 IPR016039 GO:0016746
Ahy13g0968 391 CDD CHS_like 19 385 - -
Ahy13g0968 391 Pfam Chalcone and stilbene synthases, N-terminal domain 11 229 IPR001099 -
Ahy13g0968 391 SUPERFAMILY Thiolase-like 13 233 IPR016039 GO:0016746
Ahy13g0968 391 PIRSF PKS_III 7 390 IPR011141 GO:0009058|GO:0016747
Ahy13g0968 391 Gene3D - 237 388 IPR016039 GO:0016746
Ahy13g0968 391 PANTHER TYPE III POLYKETIDE SYNTHASE B 13 389 - -
Ahy13g0968 391 PANTHER HYDROXYMETHYLGLUTARYL-COA SYNTHASE 13 389 IPR011141 GO:0009058|GO:0016747
Ahy13g0968 391 Gene3D - 5 236 IPR016039 GO:0016746
Ahy13g0968 391 Pfam Chalcone and stilbene synthases, C-terminal domain 239 389 IPR012328 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy13g0968 Ahy-Chr13 10576083 10579525 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy13g0968 87 351 Miscellaneous Gene Families AT4G34250 24.324 5.81e-11 62.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy13g0968 - - vun:114168705 688.723
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy13g0968 13 10576083 10579525 Ahy13g0968 13 10576083 10579525 ECH