Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy13g0943 ATGTCGGCAACAGGTTGTTACAAGTGCGGCAGACCAGGCCACTGGTCTCGCGACTGCCCTTCTTCTGCTCCCGACCAAAACCCCCATTCCTCCGCCGATCGCAATCCTCCCCCTCCTCGTCCTCCTCCTCCTCCTTCTTCCTCCAAGCCTTATTCCGGTGGCGGAGCCAGATTTTCCGCCGGCAGTTCCAAATCCGCGGAGAAGCCTAAGAAGGTCCCCAGATCGAGGCCTAAGCTCACGCCGGATCTCCTCCTCTCCGACGACGGCCTCGGTTACGTCCTTCGCTACTTCCCTCGCGAGTTCAAATACCGCGGTCGCGGCCACGAGGTTCAGGATTTGGGGAATTTACTTCGGATGTACACAGAATGGCACTCTCGCTTGATACCTTATTACTCTTTTGATGAATTCGTTCTCAAAGTTGAGAAAGTTGCTGCTACTAAGCGCGTCAAGATGTGCCTTAGAGATTTGAGAGAAAGAGTTGCAAATGGTGGAGATCCAACCAAATTAAATGAAACACCTGTCGGGCAAGAGATTCCGGCTGAAGAACAAGTCAATGGGGAAGCAAATCATGAAGAGCGAGATTTGTTTTCAGAACCCCAAAATGTTAATGACATGCAAGAGGATATGATTGAGGAGTTTTTCAATACAGCTACTGAAGAACCATCTCAATCAATGCAGAACGAGCCTGATGCCAACACAGTGTCCAAAAGCATTGCAACTGAAGAGACATCAAATGTAATCCAAGATAAGGAAGCCAGCATGTCTGGCAAAGATGAGATAACAGAAGAGCAGAGAGCACGAATGGAAGAAAATAGGTTGAAGGCACTCCAAAGGCGTGCTGCTCGAGCCACCGCCATATCACAGGCCTCTTGA 873 0.4994 MSATGCYKCGRPGHWSRDCPSSAPDQNPHSSADRNPPPPRPPPPPSSSKPYSGGGARFSAGSSKSAEKPKKVPRSRPKLTPDLLLSDDGLGYVLRYFPREFKYRGRGHEVQDLGNLLRMYTEWHSRLIPYYSFDEFVLKVEKVAATKRVKMCLRDLRERVANGGDPTKLNETPVGQEIPAEEQVNGEANHEERDLFSEPQNVNDMQEDMIEEFFNTATEEPSQSMQNEPDANTVSKSIATEETSNVIQDKEASMSGKDEITEEQRARMEENRLKALQRRAARATAISQAS* 291
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy13g0943 290 MobiDBLite consensus disorder prediction 31 49 - -
Ahy13g0943 290 Coils Coil 266 286 - -
Ahy13g0943 290 PANTHER TIMELESS-INTERACTING PROTEIN 1 288 - -
Ahy13g0943 290 MobiDBLite consensus disorder prediction 239 265 - -
Ahy13g0943 290 Pfam Replication Fork Protection Component Swi3 78 159 IPR012923 GO:0005634|GO:0006974|GO:0048478
Ahy13g0943 290 SUPERFAMILY Retrovirus zinc finger-like domains 4 27 IPR036875 GO:0003676|GO:0008270
Ahy13g0943 290 PANTHER TIMELESS INTERACTING-RELATED 1 288 IPR040038 GO:0000076
Ahy13g0943 290 Pfam Zinc knuckle 5 21 IPR001878 GO:0003676|GO:0008270
Ahy13g0943 290 ProSiteProfiles Zinc finger CCHC-type profile. 6 21 IPR001878 GO:0003676|GO:0008270
Ahy13g0943 290 MobiDBLite consensus disorder prediction 1 82 - -
Ahy13g0943 290 Gene3D - 2 78 - -
Ahy13g0943 290 SMART c2hcfinal6 5 21 IPR001878 GO:0003676|GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy13g0943 Ahy-Chr13 10049849 10052149 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy13g0943 K10904 - gmx:100799216 348.977