Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy13g0938 ATGAGAGGCCTCCTTTCAAGTACGAAGCTCATTGCTTCGAAGCTCTTCCATCATCACCATGGAGGAGTAGCAGCAGCAACATCACCACCTCAATTGATGCGGAACATGAGCCTCATTCCAATGGTGATCGAGCACTCCTCCCGAGGAGAGAGAGCCTACGATATCTTCTCCCGACTCCTCAAGGAGCGCATCGTCTGCATCAACGGACCCATCTCCGACGACACCGCACACGTCGTCGTTGCCCAGCTCCTCTTCCTCGAGTCCGAGAACCCTTCCAAGCCCATCCACATGTACCTCAATTCCCCCGGTGGCGCCGTCACTGCAGGTCTTGCTATTTATGATACTATGCAATACATCCGGTCTCCGATTCATACAATTTGTTTGGGTCAAGCTGCATCTATGGGTTCTTTGCTATTGGCTGCGGGTGCTAAGGGTCAGAGGCGCTCTCTTCCAAATGCAACAGTCATGATTCATCAGCCTTCTGGTGGATACAGTGGTCAGGCAAAAGATATTGCTATTCATACCAAGCAGATTGTTCGGATGTGGGATTCCTTGAATGCAATTTATGCAAAGCATACAGGCCAACCAGTTGATATTATTCAGAAGAATATGGATAGGGATTATTTCATGACTGCAGAGGAGGCAAAGGAGTTTGGAATTATTGATGAGGTTATTGATCAAAGACCATTGACTTTGGTTTCAGATGCTGTTACTAGTGAAGACAAAGATAAAGACTCTAGTTAG 744 0.4745 MRGLLSSTKLIASKLFHHHHGGVAAATSPPQLMRNMSLIPMVIEHSSRGERAYDIFSRLLKERIVCINGPISDDTAHVVVAQLLFLESENPSKPIHMYLNSPGGAVTAGLAIYDTMQYIRSPIHTICLGQAASMGSLLLAAGAKGQRRSLPNATVMIHQPSGGYSGQAKDIAIHTKQIVRMWDSLNAIYAKHTGQPVDIIQKNMDRDYFMTAEEAKEFGIIDEVIDQRPLTLVSDAVTSEDKDKDSS* 248
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy13g0938 247 PRINTS Clp protease catalytic subunit P signature 203 222 IPR001907 GO:0004176|GO:0004252|GO:0006508
Ahy13g0938 247 PRINTS Clp protease catalytic subunit P signature 54 69 IPR001907 GO:0004176|GO:0004252|GO:0006508
Ahy13g0938 247 PRINTS Clp protease catalytic subunit P signature 146 165 IPR001907 GO:0004176|GO:0004252|GO:0006508
Ahy13g0938 247 PRINTS Clp protease catalytic subunit P signature 94 114 IPR001907 GO:0004176|GO:0004252|GO:0006508
Ahy13g0938 247 PRINTS Clp protease catalytic subunit P signature 125 142 IPR001907 GO:0004176|GO:0004252|GO:0006508
Ahy13g0938 247 PANTHER ATP-DEPENDENT CLP PROTEASE PROTEOLYTIC SUBUNIT 31 245 IPR023562 -
Ahy13g0938 247 Pfam Clp protease 48 227 IPR023562 -
Ahy13g0938 247 ProSitePatterns Endopeptidase Clp serine active site. 125 136 IPR018215 -
Ahy13g0938 247 ProSitePatterns Endopeptidase Clp histidine active site. 147 160 IPR033135 -
Ahy13g0938 247 Hamap ATP-dependent Clp protease proteolytic subunit [clpP]. 38 228 IPR001907 GO:0004176|GO:0004252|GO:0006508
Ahy13g0938 247 Gene3D - 29 232 - -
Ahy13g0938 247 PANTHER ATP-DEPENDENT CLP PROTEASE PROTEOLYTIC SUBUNIT 31 245 - -
Ahy13g0938 247 CDD S14_ClpP_2 54 224 IPR001907 GO:0004176|GO:0004252|GO:0006508
Ahy13g0938 247 SUPERFAMILY ClpP/crotonase 46 228 IPR029045 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy13g0938 Ahy-Chr13 10005016 10006889 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy13g0938 K01358 - jre:108988528 390.193