Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy13g0930 ATGGCTGAGAGTGTGAGAGAATCAATAAAAGAACAAATCTCTATGTTTGATGAGAAAATGATAAGTGCTCAAAGGGCTGCTAGGAGGGAAAACTGGAGGGAATTCAAGAAAATCTTTGAAGAAGATAGGATGCGATTACTTGAACCGCTTGACTTATTTGGGAACACTGCCATCCACATTGCGACTCACTCCAATAGTCCAAATCTCTTGCAGGAACTTCTGGAGATGCTTCCTCGACAAGAAAGGTGGCGCGCGATGAGAATGGGGAATTGCGTCAATAACACCCTTCTGCATGAGATTATCTTTTGCACAACGGTCGAAATGGCTGGTGTTGTGTTCAAGTTGGAGAAGGAGCTGCAGCAAGAAGAACCATATGAGCCCCTTGTAGAGGTAAGAAATGATTCTGGTGAATCCCCTCTGTTCAGGGCTGCTAAGCTTGGAAAGCTGAAGATGCTCAAGTATATGGCAAAACATGTGGTTGGTGACATAAGAAGTCATTTTGTAAGATTTGATAGATGTTCCATTCTTCACGCTTGCATTCTTGGTCAATTCTTTGATGTTGCTATTTGGTTATTGAAATTGGATGGAAATTTGGCTCAACACAAGGATATGGATGGGTTGACATGTCTTCAACTTCTTGCCAACATGCCTCTTGTTTTTCGGAGCCAAACCCCCTCAATGGGAGCAGTGAAGAACCTTATGTATTATTTGCTTCCAGACGAAGGATATGAAATTGATGATGATTATGATGAGAAGGGAGAGGAGGAGGAAGAGAGTGTTGTGTTCAGACAGAAAACAGATCTAGAAAGTGGTCCACTGGATGAGGCAAAGCAACCCGTTCATCAATTTGCTGCTTTTTCAAGGATCAACTATTCTATATGGAAAATTCTGGCCAAAGAGTTCAATGGGATTGGACATATTTGGCAAAAGAAGAAACAACACAAGTTAGCAGAGTGTCTGGCCGAGTTGTTAGTGCAGAAGGACTTCTCATGGCAGATTTCTTTTCATTCAAATTTTCAACCATTGATTGTGTTGCCAATTCTTTCCTCCAAACTAGACAGAATAAAAGAAATTCAGCTGATGAAGGAGAAACGCCAGTTAGTTGAAATAGCTCATTCTAGAATCAGCAAACCTTTGCTCAAGGAATCCATTTCCGAAGCATCCCATTTTAAAAACTACACACCTCTTCTCATGGCAGCCGGTTCGGGAATCGTAGAAATTGTTGAAAAAATCATTGACATGAATCCTGAGGCTATTAGTCATGTTAGCCAGGATGAACACAATGTTCTACACATGGCTGTGAAGCACCGGCAGCTTAAAATCTTCAATCTGATAAAGAGAAATTCTGCATTCAAATCATTGATACACAGGATAACCGGGGAAGGTCGCACTCTCTTGCACCAAGTTGCTAGAATGGAGTTTTACAAAGAGCAACGGCTCCCTGGTGTGGCGTTCCAACTGCAAGACGAGTTGCGTTGGTACGAAAGAGTGAGAAGGATTGTTCCTCCTCACTACTTAATGCATTGTGACAAAGACGGCCTAACTGCAAAAGATGTTTTGGAAATGGAGCATCAGGATATGCACAAAGAGGCAAAGTCCTGGATAAAGGAGACAGCTCAATCATGCTCCACCGTAGCAGTTCTCGTTGCCACAGTTGTCTTTGCCGCAGCCTATACAATCCCAGGTGGGAGCCAAAACGGCACGCCAGTGTTCTTCGGCTCACGAGTCTTCCTCTTCTTCACTATCACTGATGTTGTGGCCCTTGTGAGCTCACTTGCCTCAGTGGTGATGTTCCTTTCAATCCTGACATCGCCGTTCGAGCTATGGGATTTCTACAAGTCCCTCCCAAGAAAGCTCAGCCTGGGATTTGCATTGCTGTTCTTCTCATTGGTGTGCACAATGCTGGCATTCAGCGCAACCGTTTTGCTGACGATTCGGTTGGATAACAAGGAATGGACTTCTATTTTGTTCTATTGTGCTGGATTCCTTCCTGTGGCTATATTTGCATGGATGCAATTCCCACTCTATAAGACTCTTCAAAAATTAGTTAGGAGGCTTTGCAACGGTGTTAAGCAGTTGGTGCCAACTACATTGATCAATTGTTTCAAAAGACACAAAAGATATTAA 2127 0.4302 MAESVRESIKEQISMFDEKMISAQRAARRENWREFKKIFEEDRMRLLEPLDLFGNTAIHIATHSNSPNLLQELLEMLPRQERWRAMRMGNCVNNTLLHEIIFCTTVEMAGVVFKLEKELQQEEPYEPLVEVRNDSGESPLFRAAKLGKLKMLKYMAKHVVGDIRSHFVRFDRCSILHACILGQFFDVAIWLLKLDGNLAQHKDMDGLTCLQLLANMPLVFRSQTPSMGAVKNLMYYLLPDEGYEIDDDYDEKGEEEEESVVFRQKTDLESGPLDEAKQPVHQFAAFSRINYSIWKILAKEFNGIGHIWQKKKQHKLAECLAELLVQKDFSWQISFHSNFQPLIVLPILSSKLDRIKEIQLMKEKRQLVEIAHSRISKPLLKESISEASHFKNYTPLLMAAGSGIVEIVEKIIDMNPEAISHVSQDEHNVLHMAVKHRQLKIFNLIKRNSAFKSLIHRITGEGRTLLHQVARMEFYKEQRLPGVAFQLQDELRWYERVRRIVPPHYLMHCDKDGLTAKDVLEMEHQDMHKEAKSWIKETAQSCSTVAVLVATVVFAAAYTIPGGSQNGTPVFFGSRVFLFFTITDVVALVSSLASVVMFLSILTSPFELWDFYKSLPRKLSLGFALLFFSLVCTMLAFSATVLLTIRLDNKEWTSILFYCAGFLPVAIFAWMQFPLYKTLQKLVRRLCNGVKQLVPTTLINCFKRHKRY* 709
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy13g0930 708 SUPERFAMILY Ankyrin repeat 386 474 IPR036770 -
Ahy13g0930 708 PANTHER CASKIN 39 680 - -
Ahy13g0930 708 SUPERFAMILY Ankyrin repeat 25 214 IPR036770 -
Ahy13g0930 708 Pfam Domain of unknown function 533 642 IPR026961 -
Ahy13g0930 708 SMART ANK_2a 171 200 IPR002110 GO:0005515
Ahy13g0930 708 SMART ANK_2a 425 454 IPR002110 GO:0005515
Ahy13g0930 708 SMART ANK_2a 53 82 IPR002110 GO:0005515
Ahy13g0930 708 SMART ANK_2a 391 421 IPR002110 GO:0005515
Ahy13g0930 708 SMART ANK_2a 135 165 IPR002110 GO:0005515
Ahy13g0930 708 Gene3D - 354 475 IPR036770 -
Ahy13g0930 708 Gene3D - 2 216 IPR036770 -
Ahy13g0930 708 PANTHER REPEAT-CONTAINING PROTEIN, PUTATIVE-RELATED 39 680 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy13g0930 Ahy-Chr13 9924189 9928028 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy13g0930 306 678 Miscellaneous Gene Families AT3G12360 25.610 2.79e-16 80.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy13g0930 - - gmx:100811106 975.311