Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy13g0910 ATGGCGACAGAGGAAGGAGAAGCTGCCACGGATAACGAAGTAAATGTTGCTTTCGAAGAAGAAGAGAAGCAAAATCAGACCGAAGTTGATGATGCAGAAGCAGAAGAAGACAATGATGACGATGAAGGAGGAGGAGAAGAAGAAGAAGAAGAAGAAGAGGCCGAGGAGGAGGAGGAGGAGGGAGAGGGCGAATACACTTTCAGATTCACCAACGGAATGAGTCATTTGGATTTCGTTCGAAACAACGATTCCGACGTCCAACGTTACCAGCAATTCGAGCTCCTTGAGCATCAAGCTCTCGCTGATAGAAAGCGCAAAGCCCTTTCACTTTCAGATTCTCATCAGGAAGAGACTCCTTCAAAGAAGGGGAGGGAAGATGATAATCCTGGGGCAACCATGGCTGAGATAATGGAAGCAATGAATTTTGGCGCACGCAGGAGATCAAGAAAGCAAAAGAAAAGAGGTAGGCGAAAAGGATCAAGGAATAAGCTAAACCCACAGATAACAAGAATGCTCGGTGATGCGACGCTTCACTACGTTTGTCGCCGTTATGACCAGGCTATAGCTGTCTCACATGAAGTTATTAGGCTGGCACCAAATGTGGCTGATTCGTATCACACCCTTGGACTTGTATATTATGACCTTGAGGATTACAAAAGGGCGATGGATTTTTACATGATTGCTGCTCATTTGACTCCTAAAGATTCATCCCGTTGGAAAATGCTTTATGACTGGTCCAGAGAACAAGGTGATATTGGTCAAGCCAGTTACTGCCTTTCCAAAGCAATAACAGCAGATCCCAAGGACGAGACTCTTAGGAAAGAACGTGCAATGTTTTATGTTGAGCTTGGAGATTATCAAAAAGCTGCTGCTGCATATGAGCAAGTACATCACCTTTGTCCTGAGAATGTTGAAGCACTAACAGATGCAGCTAAGTGCTACCAAAAATGTGGTCAAGTTGCCTGTTCAATCCAAATTCTTGAAGATTATCTAAGGAGTCAACCAGACAAAGCTCATGCAAGCTTAGTTGACCTATTGGCTACTATATACATGGAAACTAAGGCACATGACAGAGCTCTTCAGCATATTGAGCATGTTCGAATAGTAAATTCAGGGGAAGAAATGCCTTTGAACCTGAAAATTAAGTCTGGAATCTGCCATGCTCATCTTGGAAACATGGAGAGGGCTCAGGCTTGCTTCAGTGACATAAAACCAGAGAATGCAATTGAACATGTTGAGTTGGTCACAGAGGCTGCAGACTCCTTAATGGAACTTGAGCATTATGACTCCGCATTGAGTTATTATTTGATGTTGGAAGGCAATGGTGGAAATGAACATGGTCTTCTGTATCTGAAAATTGCTAGGTGTTATCTATCCTTGAAAGAAAGGTTACAAGCAATTCACTTTTTTAGCAAAGCCCTAGAAACACTACAAGATGATGTTGATGCACGCATTACGTTGGCTTCCCTTTTGATTGAAGAAGGGAAAGAAGATGAAGCCATTTCTTTGCTTTCTCCTCCAAAGGATTCTGACTCTGCTGAAGCACATTCTGTAAAGCCAAATAAATGGTGGGTTAATGAAAGGATAAAACTGAAGCTTTGCAATATATATTGGAATAAAGGGTTGCTAGATGATTTTGTGGATGCAATTTTTCCTATGATACGTGAATCATTGTACGTCGCAACCCTTCGACAAAGGGGTAAATCGAAAAAACGCCTCTCTACACGAGACCTGGTTGAAAGGGTTAGGGTAATGAATGCTCCAGAAAAGGATAATGTATTTCAAGGATTCAGGCCTATAGCTACTCCTTCTGATAGGTCTGACCGGTGGAAAGCTTCCAGGGCAAAACGATCGCTTCAAAAGAAGGAAATTGAGAAGGAGAAAAAGAAAGCTGAGGCATTGGCCGCTGGAATTGACTGGCTGAGCAATGATTCAGATATTGAACCTCAGAGAGTACACAAAGAACCTCCATTATGTAATCTTCTCAAGGATGAAGAGCATCACCAGCTAATAATTAATTTGTGCAAGGCATTAGCTTCCTTACAAAGGTATTGGGAAGCATTGGAGATTATAAATATTACTCTCAGATTGACTCATTCTGCACTTTCTGCTGACAAGAAAGAGGAACTTCGATCTCTTGGAGCTCAAATGGCATACAACACCACGGATCCTAAGCATGGGTTTGATTGTGTAAAATACATTGTTCAGCAACATCCGTACAGTGTTGCTGCTTGGAATTGCTACTACAAGGTTATGTCTAGATTGGAAAATCGAGATACAAGACACTCCAAGTTTATACTTAATATGCAAGGAAAGTTCGTGGATTGTGTACCTCCTATTCTCATTTCTGCTAATCAGTATACTATAATTAGCCATCACCAAGATGCTGCAAGGAAATACTTAGAAGCTTATAAACTTTTGCCAGAGAATCCCTTGGTTAATCTTTGCGTTGGAACTGCCTTGATCAACCTAGCATTGGGTTTAAGACTTCAAAATAAGCATCAGTGTGTTGTACAAGGTTTAGCGTTCCTCTATAACAATTTAAGGATCTGCGACAACAGCCAGGAATCATTGTACAACATAGCTAGGGCGTTCCATCATGTTGGTCTTGTAACTTTGGCAGCTTTCTATTATGAGAAAGTGCTTGCTATTCGTGAGAAGGACTATCCCATTCCAAAACTTCTCAATGAAACACCGGATATTGCTGAAAATCATAAACCCGGTTACTGTGATCTTCGCAGAGAGGCTGCTCACAATCTGCACTTGATCTACAAGAAGAGTGGAGCTCTTGATCTTGCTAGACAAGTTCTAAAAGATCATTGCACCTTCTGA 2832 0.417 MATEEGEAATDNEVNVAFEEEEKQNQTEVDDAEAEEDNDDDEGGGEEEEEEEEAEEEEEEGEGEYTFRFTNGMSHLDFVRNNDSDVQRYQQFELLEHQALADRKRKALSLSDSHQEETPSKKGREDDNPGATMAEIMEAMNFGARRRSRKQKKRGRRKGSRNKLNPQITRMLGDATLHYVCRRYDQAIAVSHEVIRLAPNVADSYHTLGLVYYDLEDYKRAMDFYMIAAHLTPKDSSRWKMLYDWSREQGDIGQASYCLSKAITADPKDETLRKERAMFYVELGDYQKAAAAYEQVHHLCPENVEALTDAAKCYQKCGQVACSIQILEDYLRSQPDKAHASLVDLLATIYMETKAHDRALQHIEHVRIVNSGEEMPLNLKIKSGICHAHLGNMERAQACFSDIKPENAIEHVELVTEAADSLMELEHYDSALSYYLMLEGNGGNEHGLLYLKIARCYLSLKERLQAIHFFSKALETLQDDVDARITLASLLIEEGKEDEAISLLSPPKDSDSAEAHSVKPNKWWVNERIKLKLCNIYWNKGLLDDFVDAIFPMIRESLYVATLRQRGKSKKRLSTRDLVERVRVMNAPEKDNVFQGFRPIATPSDRSDRWKASRAKRSLQKKEIEKEKKKAEALAAGIDWLSNDSDIEPQRVHKEPPLCNLLKDEEHHQLIINLCKALASLQRYWEALEIINITLRLTHSALSADKKEELRSLGAQMAYNTTDPKHGFDCVKYIVQQHPYSVAAWNCYYKVMSRLENRDTRHSKFILNMQGKFVDCVPPILISANQYTIISHHQDAARKYLEAYKLLPENPLVNLCVGTALINLALGLRLQNKHQCVVQGLAFLYNNLRICDNSQESLYNIARAFHHVGLVTLAAFYYEKVLAIREKDYPIPKLLNETPDIAENHKPGYCDLRREAAHNLHLIYKKSGALDLARQVLKDHCTF* 944
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy13g0910 943 Coils Coil 612 632 - -
Ahy13g0910 943 MobiDBLite consensus disorder prediction 146 163 - -
Ahy13g0910 943 ProSiteProfiles TPR repeat profile. 270 303 IPR019734 GO:0005515
Ahy13g0910 943 MobiDBLite consensus disorder prediction 1 67 - -
Ahy13g0910 943 PANTHER TRANSCRIPTION INITIATION FACTOR IIIC TFIIIC , POLYPEPTIDE 3-RELATED 35 943 IPR039340 GO:0006383
Ahy13g0910 943 SMART tpr_5 855 888 IPR019734 GO:0005515
Ahy13g0910 943 SMART tpr_5 447 480 IPR019734 GO:0005515
Ahy13g0910 943 SMART tpr_5 340 373 IPR019734 GO:0005515
Ahy13g0910 943 SMART tpr_5 168 201 IPR019734 GO:0005515
Ahy13g0910 943 SMART tpr_5 270 303 IPR019734 GO:0005515
Ahy13g0910 943 SMART tpr_5 202 235 IPR019734 GO:0005515
Ahy13g0910 943 ProSiteProfiles TPR repeat profile. 202 235 IPR019734 GO:0005515
Ahy13g0910 943 MobiDBLite consensus disorder prediction 24 63 - -
Ahy13g0910 943 Pfam Tetratricopeptide repeat 202 226 IPR019734 GO:0005515
Ahy13g0910 943 SUPERFAMILY TPR-like 781 891 IPR011990 GO:0005515
Ahy13g0910 943 Gene3D Tetratricopeptide repeat domain 584 940 IPR011990 GO:0005515
Ahy13g0910 943 Gene3D Tetratricopeptide repeat domain 153 375 IPR011990 GO:0005515
Ahy13g0910 943 Gene3D Tetratricopeptide repeat domain 378 551 IPR011990 GO:0005515
Ahy13g0910 943 SUPERFAMILY TPR-like 176 503 IPR011990 GO:0005515
Ahy13g0910 943 Coils Coil 15 38 - -
Ahy13g0910 943 MobiDBLite consensus disorder prediction 105 165 - -
Ahy13g0910 943 MobiDBLite consensus disorder prediction 105 131 - -
Ahy13g0910 943 Pfam Tetratricopeptide repeat 282 342 - -
Ahy13g0910 943 ProSiteProfiles TPR repeat region circular profile. 202 235 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy13g0910 Ahy-Chr13 9699457 9706610 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy13g0910 217 502 Glycosyltransferase AT3G04240 22.727 4.79e-06 48.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy13g0910 K15201 - gmx:100804533 1321.22