Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy13g0844 ATGGGTCGCCTTGTCCTCTTTCTCACTATCATCGTCTTCTTCGCATTCTCTTTCTTCTCAGAGGTAGAATCAGCGCGGTTCAGGGTTATTAACAAGTGCCGCCACCCAATATGGCCGGGGCTTCTCTCCGGCGCCACCTCGCCGCCGCTACCGACCACCGGCTTCCTCCTCAACGCCGGAAGATCGAGGACAATCACCATCCCAAGGTCCTGGTCGGGTCGGATTTGGGCGAGGACACTCTGCGGCCAAGACTCCGACGGAAAGTTCTCGTGCGTCACCGCAGACTGCGGCTCCGGCAAGGTGGAGTGTGGTGGCGGGGGAGCAAAGCCGCCGGCAACATTAGCGGAGTTCACTCTCAACGGAGCTGACGGGCTTGACTTCTATGACGTGAGCTTGGTCGACGGTTACAACCTTCCGATGCTGATCGTGGCTCAGGGAGGGACGAGAGGAGGGTGCAGCGCCACCGGGTGCCTGGTGGACTTGAACGGTGCGTGTCCTTCAGATCTGAGAGTGGCGCGTGGGAATGGAACTAAAAGTGGTAGAGGTGGTGGGGTCGCGTGCAGAAGCGCGTGTGAGGCGTTTGGGGACCCAAGGTATTGTTGCAGTGAGGCTTACTCTACGCCTGACACGTGTGGCCCTTCGGCTTACTCGCTTTACTTCAAACACGCTTGCCCACGCGCGTATAGCTACGCGTATGATGACAAAACCAGCACTTACACGTGTGCTTCCGCTAATTACTTAATCATTTTCTGCCCTTTGCCTTACACCAGCCAAAAGGTGCTTGGAGCAAGAAAAGATGGCGTGCCGCTTCCTCTGGTAAACAAAACTATGATGTACTTATCAAGGCCACACTCTGGCAGTTCTTCATCCTCAGGCAGATAG 882 0.5624 MGRLVLFLTIIVFFAFSFFSEVESARFRVINKCRHPIWPGLLSGATSPPLPTTGFLLNAGRSRTITIPRSWSGRIWARTLCGQDSDGKFSCVTADCGSGKVECGGGGAKPPATLAEFTLNGADGLDFYDVSLVDGYNLPMLIVAQGGTRGGCSATGCLVDLNGACPSDLRVARGNGTKSGRGGGVACRSACEAFGDPRYCCSEAYSTPDTCGPSAYSLYFKHACPRAYSYAYDDKTSTYTCASANYLIIFCPLPYTSQKVLGARKDGVPLPLVNKTMMYLSRPHSGSSSSSGR* 294
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy13g0844 293 Gene3D Thaumatin 25 252 IPR037176 -
Ahy13g0844 293 SMART tha2 27 252 IPR001938 -
Ahy13g0844 293 ProSiteProfiles Thaumatin family profile. 24 252 IPR001938 -
Ahy13g0844 293 ProSitePatterns Thaumatin family signature. 87 103 IPR017949 -
Ahy13g0844 293 CDD TLP-PA 27 251 - -
Ahy13g0844 293 PANTHER OS03G0233200 PROTEIN 6 263 IPR001938 -
Ahy13g0844 293 PIRSF PR5 1 284 IPR001938 -
Ahy13g0844 293 PRINTS Pathogenesis-related protein signature 126 142 IPR001938 -
Ahy13g0844 293 PRINTS Pathogenesis-related protein signature 26 38 IPR001938 -
Ahy13g0844 293 PRINTS Pathogenesis-related protein signature 74 85 IPR001938 -
Ahy13g0844 293 SUPERFAMILY Osmotin, thaumatin-like protein 26 252 IPR037176 -
Ahy13g0844 293 Pfam Thaumatin family 31 252 IPR001938 -
Ahy13g0844 293 PANTHER PATHOGENESIS-RELATED THAUMATIN SUPERFAMILY PROTEIN 6 263 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy13g0844 Ahy-Chr13 8929494 8932256 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy13g0844 5 252 Receptor kinase-like Gene Family AT5G38280 49.600 1.75e-81 257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy13g0844 - - ccaj:109798931 484.952